RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ZNF419Q96HQ0 510 aaPredicted RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 CCDC136Q96JN2 1154 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 PTCHD1Q96NR3 888 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 TM9SF2Q99805 663 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 SLC46A2Q9BY10 475 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 NOL6Q9H6R4 1146 aaKnown RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 RBM28Q9NW13 759 aaKnown RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 PPT2Q9UMR5 302 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 NFE2L3Q9Y4A8 694 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 ASCC3Q8N3C0 2202 aaKnown RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 MTCL1Q9Y4B5 1905 aaKnown RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 SPAG17Q6Q759 2223 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 OR6C75A6NL08 312 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 K7EQS6 105 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 PODXLO00592 558 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 B4GALT5O43286 388 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 PSMD10O75832 226 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 NFATC1O95644 943 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 PLA2G1BP04054 148 aaKnown RBP6.32□□□□□ -1.4
NCL-208ENST00000466274 CD3EP07766 207 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 SFTPCP11686 197 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 INHBCP55103 352 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 YWHAHQ04917 246 aaPredicted RBP6.32□□□□□ -1.4
NCL-208ENST00000466274 TARDBPQ13148 414 aaKnown RBP eCLIP6.32□□□□□ -1.4
NCL-208ENST00000466274 MTF1Q14872 753 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 HLA-BQ31612 363 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 TBC1D25Q3MII6 688 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 DCAF4L1Q3SXM0 396 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 VWA3BQ502W6 1294 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 ZNF394Q53GI3 561 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 ANKRD45Q5TZF3 282 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 ERICH6BQ5W0A0 696 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 CD300LGQ6UXG3 332 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 CYP2R1Q6VVX0 501 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 USP37Q86T82 979 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 CDR2LQ86X02 465 aaPredicted RBP6.32□□□□□ -1.4
NCL-208ENST00000466274 ZBTB8OSQ8IWT0 167 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 ALLCQ8N6M5 410 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 SNRNP27Q8WVK2 155 aaKnown RBP6.32□□□□□ -1.4
NCL-208ENST00000466274 USP13Q92995 863 aaPredicted RBP6.32□□□□□ -1.4
NCL-208ENST00000466274 LENG9Q96B70 501 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 PGLYRP2Q96PD5 576 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 PPP1R10Q96QC0 940 aaKnown RBP6.32□□□□□ -1.4
NCL-208ENST00000466274 DPH1Q9BZG8 443 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 TOPORSQ9NS56 1045 aaPredicted RBP6.32□□□□□ -1.4
NCL-208ENST00000466274 HSFX1Q9UBD0 423 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 FTSJ1Q9UET6 329 aa6.32□□□□□ -1.4
NCL-208ENST00000466274 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.32□□□□□ -1.4
NCL-208ENST00000466274 SPTAN1Q13813 2472 aaKnown RBP6.32□□□□□ -1.4
NCL-208ENST00000466274 MYH6P13533 1939 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 ESYT2A0FGR8 921 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 MEI4A8MW99 385 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 E7EWF7 191 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 SGK1O00141 431 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 BRINP1O60477 761 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 APODP05090 189 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 MYF5P13349 255 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 YWHABP31946 246 aaKnown RBP6.31□□□□□ -1.4
NCL-208ENST00000466274 MC3RP41968 323 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 LIFRP42702 1097 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 PLP2Q04941 152 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 GPR17Q13304 367 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 PRPF4BQ13523 1007 aaKnown RBP6.31□□□□□ -1.4
NCL-208ENST00000466274 SF3A1Q15459 793 aaKnown RBP6.31□□□□□ -1.4
NCL-208ENST00000466274 XKR9Q5GH70 373 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 C20orf194Q5TEA3 1177 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 TMCO4Q5TGY1 634 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 NAIF1Q69YI7 327 aaPredicted RBP6.31□□□□□ -1.4
NCL-208ENST00000466274 ARMCX5Q6P1M9 558 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 SLC41A1Q8IVJ1 513 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 C4orf19Q8IY42 314 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 LSMEM2Q8N112 164 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 MAB21L3Q8N8X9 362 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 IL17RCQ8NAC3 791 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 FNIP1Q8TF40 1166 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 MRPS31Q92665 395 aaKnown RBP6.31□□□□□ -1.4
NCL-208ENST00000466274 ZNF578Q96N58 590 aaPredicted RBP6.31□□□□□ -1.4
NCL-208ENST00000466274 BDH2Q9BUT1 245 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 C22orf23Q9BZE7 217 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 C2orf40Q9H1Z8 148 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 SLKQ9H2G2 1235 aaPredicted RBP6.31□□□□□ -1.4
NCL-208ENST00000466274 CPNE5Q9HCH3 593 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 GDAQ9Y2T3 454 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 SF3B6Q9Y3B4 125 aaKnown RBP6.31□□□□□ -1.4
NCL-208ENST00000466274 PCDHGB7Q9Y5F8 929 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 WDR81Q562E7 1941 aa6.31□□□□□ -1.4
NCL-208ENST00000466274 IGHV1OR15-9A0A0B4J2B8 117 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 SMIM28A0A1B0GU29 152 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.3□□□□□ -1.4
NCL-208ENST00000466274 BCAT2O15382 392 aaPredicted RBP6.3□□□□□ -1.4
NCL-208ENST00000466274 SUV39H1O43463 412 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 PRC1O43663 620 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 RFPL3O75679 317 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 OAZ2O95190 189 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 CYP21A2P08686 494 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 RXRAP19793 462 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 GUCY2CP25092 1073 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 MCM5P33992 734 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 TNFRSF4P43489 277 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 POU4F1Q01851 419 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms