RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 TNNT1P13805 278 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 KDELR1P24390 212 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 IL4RP24394 825 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 MSNP26038 577 aaKnown RBP11.52□□□□□ -0.57
VCP-204ENST00000466100 IRAK1P51617 712 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 SGSHP51688 502 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 DPYSL3Q14195 570 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 RPS6KA1Q15418 735 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 EML3Q32P44 896 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 ACBD5Q5T8D3 534 aaPredicted RBP11.52□□□□□ -0.57
VCP-204ENST00000466100 CHSY1Q86X52 802 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 UBL4BQ8N7F7 174 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 EXD1Q8NHP7 514 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 DEPDC1BQ8WUY9 529 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 OSCP1Q8WVF1 389 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 OTUB2Q96DC9 234 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.57
VCP-204ENST00000466100 KXD1Q9BQD3 176 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 FAM83CQ9BQN1 747 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 DHX35Q9H5Z1 703 aaKnown RBP11.52□□□□□ -0.57
VCP-204ENST00000466100 ZNF212Q9UDV6 495 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 OR12D3Q9UGF7 316 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 SLC12A6Q9UHW9 1150 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 FAM50BQ9Y247 325 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 WNT6Q9Y6F9 365 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 NUMBLQ9Y6R0 609 aa11.52□□□□□ -0.57
VCP-204ENST00000466100 TTC28Q96AY4 2481 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 SHROOM3Q8TF72 1996 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 LRRD1A4D1F6 860 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 DRGXA6NNA5 263 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 ESPNB1AK53 854 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 E9PAM4 449 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 PI4K2BG5E9Z4 385 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 ARNTLO00327 626 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 ZNF500O60304 480 aaPredicted RBP11.51□□□□□ -0.57
VCP-204ENST00000466100 GOT1P17174 413 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 HTR7P34969 479 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 PTPN7P35236 360 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 CDKN2BP42772 138 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 ZNF135P52742 658 aaPredicted RBP11.51□□□□□ -0.57
VCP-204ENST00000466100 VCPP55072 806 aaKnown RBP11.51□□□□□ -0.57
VCP-204ENST00000466100 CDH6P55285 790 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 RWDD2BP57060 319 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 AMPD2Q01433 879 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 DPYSQ14117 519 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 PDK2Q15119 407 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 PAPD7Q5XG87 772 aaKnown RBP11.51□□□□□ -0.57
VCP-204ENST00000466100 FBXL22Q6P050 247 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 RFWD3Q6PCD5 774 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 MFSD7Q6UXD7 560 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 IGSF8Q969P0 613 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 RPGRIP1Q96KN7 1286 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 CSPG4P5Q96PW8 444 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 NAPGQ99747 312 aaPredicted RBP11.51□□□□□ -0.57
VCP-204ENST00000466100 EPAS1Q99814 870 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 ZNF670Q9BS34 389 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 HERPUD2Q9BSE4 406 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 SIK2Q9H0K1 926 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 CARD9Q9H257 536 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 LINC00597Q9H2U6 94 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 CWC15Q9P013 229 aaKnown RBP11.51□□□□□ -0.57
VCP-204ENST00000466100 RCOR3Q9P2K3 495 aaPredicted RBP11.51□□□□□ -0.57
VCP-204ENST00000466100 TBC1D14Q9P2M4 693 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 PPARGC1AQ9UBK2 798 aaKnown RBP11.51□□□□□ -0.57
VCP-204ENST00000466100 VANGL2Q9ULK5 521 aa11.51□□□□□ -0.57
VCP-204ENST00000466100 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.51□□□□□ -0.57
VCP-204ENST00000466100 hCG_1818297A0A087WSY0 165 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 F5H5T6 163 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 TRDMT1O14717 391 aaKnown RBP11.5□□□□□ -0.57
VCP-204ENST00000466100 SLC9A3R1O14745 358 aaPredicted RBP11.5□□□□□ -0.57
VCP-204ENST00000466100 PYGMP11217 842 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 ARSAP15289 507 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 PSMC3P17980 439 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 HCAR3P49019 387 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 DNA2P51530 1060 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 COPS2P61201 443 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 ZP2Q05996 745 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 MMRN1Q13201 1228 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 GRM2Q14416 872 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 PPP2R5EQ16537 467 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 GAB4Q2WGN9 574 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 PPP6R3Q5H9R7 873 aaPredicted RBP11.5□□□□□ -0.57
VCP-204ENST00000466100 FYB2Q5VWT5 728 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 TRIM68Q6AZZ1 485 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 AADACL2Q6P093 401 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 SYT10Q6XYQ8 523 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 SPOCD1Q6ZMY3 1216 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 RFX8Q6ZV50 586 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 NLRP14Q86W24 1093 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 ADHFE1Q8IWW8 467 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 RCOR2Q8IZ40 523 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 ADGRG2Q8IZP9 1017 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 LGI2Q8N0V4 545 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 KCTD6Q8NC69 237 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 TTC16Q8NEE8 873 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 RSAD2Q8WXG1 361 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 NXPE3Q969Y0 559 aa11.5□□□□□ -0.57
VCP-204ENST00000466100 TBC1D31Q96DN5 1066 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms