RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 FBXL22Q6P050 247 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 ALKBH5Q6P6C2 394 aaKnown RBP12.07□□□□□ -0.48
CUX1-207ENST00000465461 DCUN1D2Q6PH85 259 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 SND1Q7KZF4 910 aaKnown RBP eCLIP12.07□□□□□ -0.48
CUX1-207ENST00000465461 CARNMT1Q8N4J0 409 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 ALLCQ8N6M5 410 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 TC2NQ8N9U0 490 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 TERB1Q8NA31 727 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 USP33Q8TEY7 942 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 FAM172AQ8WUF8 416 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 SORCS1Q8WY21 1168 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 EXOC4Q96A65 974 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 VCPIP1Q96JH7 1222 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 ACOX2Q99424 681 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 DDX50Q9BQ39 737 aaKnown RBP12.07□□□□□ -0.48
CUX1-207ENST00000465461 PACSIN1Q9BY11 444 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 SPTLC3Q9NUV7 552 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 RRN3Q9NYV6 651 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 VANGL2Q9ULK5 521 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 F5H5T6 163 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 ENDOD1O94919 500 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 KLF8O95600 359 aaPredicted RBP12.06□□□□□ -0.48
CUX1-207ENST00000465461 SP9P0CG40 484 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 SLC2A3P11169 496 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 HLA-FP30511 346 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 CD70P32970 193 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 PTPN9P43378 593 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 TNFRSF4P43489 277 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 CXCL12P48061 93 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 PXNP49023 591 aaPredicted RBP12.06□□□□□ -0.48
CUX1-207ENST00000465461 ZNF252P-AS1Q0IIN9 211 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 TSR1Q2NL82 804 aaKnown RBP12.06□□□□□ -0.48
CUX1-207ENST00000465461 ASTE1Q2TB18 679 aaPredicted RBP12.06□□□□□ -0.48
CUX1-207ENST00000465461 FBXO43Q4G163 708 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 BRMS1LQ5PSV4 323 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 DAB2IPQ5VWQ8 1189 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 EGFLAMQ63HQ2 1017 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 TMEM215Q68D42 235 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 SCYL2Q6P3W7 929 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 VPS36Q86VN1 386 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 MFN1Q8IWA4 741 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 DRC7Q8IY82 874 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 SYNPOQ8N3V7 929 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 SPEM1Q8N4L4 309 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 CCDC185Q8N715 623 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 TXNDC5Q8NBS9 432 aaKnown RBP12.06□□□□□ -0.48
CUX1-207ENST00000465461 HJURPQ8NCD3 748 aaPredicted RBP12.06□□□□□ -0.48
CUX1-207ENST00000465461 CENPIQ92674 756 aaPredicted RBP12.06□□□□□ -0.48
CUX1-207ENST00000465461 ARHGEF26Q96DR7 871 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 MRFAP1L1Q96HT8 127 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 BTBD6Q96KE9 485 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 DEF6Q9H4E7 631 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 NHEJ1Q9H9Q4 299 aaPredicted RBP12.06□□□□□ -0.48
CUX1-207ENST00000465461 ABCB8Q9NUT2 735 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 PARVAQ9NVD7 372 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 ZNHIT6Q9NWK9 470 aaKnown RBP12.06□□□□□ -0.48
CUX1-207ENST00000465461 NENFQ9UMX5 172 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 CACNA1IQ9P0X4 2223 aa12.06□□□□□ -0.48
CUX1-207ENST00000465461 TMEM191CA6NGB0 347 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 WASH3PC4AMC7 463 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 SGK1O00141 431 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 SRGAP2O75044 1071 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 CNTN5O94779 1100 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 HNRNPLP14866 589 aaKnown RBP eCLIP12.05□□□□□ -0.48
CUX1-207ENST00000465461 PSMA2P25787 234 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 MAGEA9P43362 315 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 CCR3P51677 355 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 ZNF143P52747 638 aaPredicted RBP12.05□□□□□ -0.48
CUX1-207ENST00000465461 GALCP54803 685 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 LMAN2Q12907 356 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 ARTNQ5T4W7 220 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 HEATR6Q6AI08 1181 aaKnown RBP12.05□□□□□ -0.48
CUX1-207ENST00000465461 PPP1R2P3Q6NXS1 205 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 CHST9Q7L1S5 443 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 STRADAQ7RTN6 431 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 CNGA4Q8IV77 575 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 ARFGAP1Q8N6T3 406 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 ZNF513Q8N8E2 541 aaPredicted RBP12.05□□□□□ -0.48
CUX1-207ENST00000465461 IL17RCQ8NAC3 791 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 SPC24Q8NBT2 197 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 CYB5D2Q8WUJ1 264 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 RPRD1AQ96P16 312 aaPredicted RBP12.05□□□□□ -0.48
CUX1-207ENST00000465461 HHIPQ96QV1 700 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 PHOX2BQ99453 314 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 PRMT8Q9NR22 394 aaPredicted RBP12.05□□□□□ -0.48
CUX1-207ENST00000465461 MPP6Q9NZW5 540 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 SLC27A6Q9Y2P4 619 aa12.05□□□□□ -0.48
CUX1-207ENST00000465461 ANKRD62A6NC57 917 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 CHURC1-FNTBB4DL54 471 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 FAM72CH0Y354 149 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 H0Y626 953 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 K7ESF4 209 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 AKR1B10O60218 316 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 ADAM23O75077 832 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 LUC7L3O95232 432 aaKnown RBP12.04□□□□□ -0.48
CUX1-207ENST00000465461 PABPC1P11940 636 aaKnown RBP12.04□□□□□ -0.48
CUX1-207ENST00000465461 ADRA1BP35368 520 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 NUBP1P53384 320 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 DMC1Q14565 340 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 SLC18A3Q16572 532 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms