RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 CD70P32970 193 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 E2F1Q01094 437 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 SRSF6Q13247 344 aaKnown RBP15.62■□□□□ 0.09
HDAC6-214ENST00000465269 PSMD6Q15008 389 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 ZNF699Q32M78 642 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 HIST2H2BCQ6DN03 193 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 FOXR1Q6PIV2 292 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 ZNF574Q6ZN55 896 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-214ENST00000465269 CCDC81Q6ZN84 652 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 ATG14Q6ZNE5 492 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 MMAAQ8IVH4 418 aaKnown RBP15.62■□□□□ 0.09
HDAC6-214ENST00000465269 OR2T34Q8NGX1 318 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 PLEKHO2Q8TD55 490 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 TWNKQ96RR1 684 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 SLC2A11Q9BYW1 496 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 THSD1Q9NS62 852 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 PANK4Q9NVE7 773 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 GGA2Q9UJY4 613 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 TDRD6O60522 2096 aaKnown RBP15.62■□□□□ 0.09
HDAC6-214ENST00000465269 ABCA12Q86UK0 2595 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 LRRC72A6NJI9 287 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 C10orf142B7Z368 130 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 PHACTR2O75167 634 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 STAU1O95793 577 aaKnown RBP15.61■□□□□ 0.09
HDAC6-214ENST00000465269 FAM87AP0C7U9 286 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 PABPC1P11940 636 aaKnown RBP15.61■□□□□ 0.09
HDAC6-214ENST00000465269 GP1BBP13224 206 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 MAT2AP31153 395 aaKnown RBP15.61■□□□□ 0.09
HDAC6-214ENST00000465269 CST6Q15828 149 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 POM121L1PQ3SYA9 428 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 USP30Q70CQ3 517 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 LSMEM2Q8N112 164 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 CPXM2Q8N436 756 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 AADATQ8N5Z0 425 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 EXTL1Q92935 676 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 SYAP1Q96A49 352 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-214ENST00000465269 MYO19Q96H55 970 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 DEPDC7Q96QD5 511 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 BACH2Q9BYV9 841 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 PANK2Q9BZ23 570 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 DCLK3Q9C098 648 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 KIF3AQ9Y496 699 aa15.61■□□□□ 0.09
HDAC6-214ENST00000465269 FRMD3A2A2Y4 597 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 SUV39H1O43463 412 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 DLDP09622 509 aaKnown RBP15.6■□□□□ 0.09
HDAC6-214ENST00000465269 ITGB6P18564 788 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 PSMD8P48556 350 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 NUMBP49757 651 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 KIF11P52732 1056 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 METAP1P53582 386 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 COG7P83436 770 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 SKOR1P84550 965 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 CLN3Q13286 438 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 ZNF211Q13398 564 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-214ENST00000465269 BIRC3Q13489 604 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 ZNF667Q5HYK9 610 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 SPOPLQ6IQ16 392 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 SV2BQ7L1I2 683 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 OR14C36Q8NHC7 312 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 NDRG1Q92597 394 aaKnown RBP15.6■□□□□ 0.09
HDAC6-214ENST00000465269 GOLGA1Q92805 767 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 ATXN7L3BQ96GX2 97 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 OMDQ99983 421 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 ERVMER34-1Q9H9K5 563 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 FBRSQ9HAH7 460 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 STARD5Q9NSY2 213 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 MARCH2Q9P0N8 246 aa15.6■□□□□ 0.09
HDAC6-214ENST00000465269 KIAA0391O15091 583 aaKnown RBP15.59■□□□□ 0.09
HDAC6-214ENST00000465269 TGFB1I1O43294 461 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 VNN1O95497 513 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 RALAP11233 206 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 ATICP31939 592 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 SLC8A1P32418 973 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 CCR5P51681 352 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 ADPRHP54922 357 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 ALCAMQ13740 583 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 UBAP2LQ14157 1087 aaKnown RBP15.59■□□□□ 0.09
HDAC6-214ENST00000465269 E2F5Q15329 346 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 MPPE1Q53F39 396 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 RRAGBQ5VZM2 374 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 KIAA0907Q7Z7F0 614 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-214ENST00000465269 FAM217AQ8IXS0 508 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 WFIKKN2Q8TEU8 576 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 PRR11Q96HE9 360 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-214ENST00000465269 CLIC6Q96NY7 704 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 MYOCQ99972 504 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 AGPAT3Q9NRZ7 376 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 STK17AQ9UEE5 414 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 PCDHA5Q9Y5H7 936 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 LRBAP50851 2863 aa15.59■□□□□ 0.09
HDAC6-214ENST00000465269 A0A087X0B3 334 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 LY6G6EA0A0G2JKS1 128 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 GIMD1P0DJR0 217 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 DGKAP23743 735 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 RBMS1P29558 406 aaKnown RBP15.58■□□□□ 0.08
HDAC6-214ENST00000465269 CTSOP43234 321 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-214ENST00000465269 TLE1Q04724 770 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 NCOA4Q13772 614 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 BMT2Q1RMZ1 405 aa15.58■□□□□ 0.08
HDAC6-214ENST00000465269 ISXQ2M1V0 245 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms