RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TRAF3IP1Q8TDR0 691 aaPredicted RBP15□□□□□ -0.01
COL5A1-205ENST00000464187 EDEM1Q92611 657 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 P3H4Q92791 437 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 ZBP1Q9H171 429 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 FBXO44Q9H4M3 255 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 POC1B-GALNT4F8VUJ3 575 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 M0QYT0 321 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 MDM4O15151 490 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 CTSAP10619 480 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 RDXP35241 583 aaKnown RBP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 BMPR1AP36894 532 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 YWHAGP61981 247 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 RPL10AP62906 217 aaKnown RBP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 ANKRD20A8PQ5CZ79 823 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 OTUD1Q5VV17 481 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 TPGS2Q68CL5 300 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 BNIPLQ7Z465 357 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 MAP7D3Q8IWC1 876 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 GPR65Q8IYL9 337 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 PLD5Q8N7P1 536 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 DYDC1Q8WWB3 177 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 CABS1Q96KC9 395 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 SPATA17Q96L03 361 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 MLXIPLQ9NP71 852 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 SCML2Q9UQR0 700 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 NR2E3Q9Y5X4 410 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 SYNJ2BP-COX16A0A087WUM0 186 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 LINC01553A4QN01 128 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 RASA4BC9J798 803 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 APOL1O14791 398 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 RASA4O43374 803 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 LILRB3O75022 631 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 VIMP08670 466 aaKnown RBP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 ATF6P18850 670 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 TGM2P21980 687 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 CA8P35219 290 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 CTNNB1P35222 781 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 MAGEA10P43363 369 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 TUFMP49411 452 aaKnown RBP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 PGFP49763 221 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 NME3Q13232 169 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 RAB33AQ14088 237 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 RNF187Q5TA31 235 aaPredicted RBP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 SLC9A4Q6AI14 798 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 PIGWQ7Z7B1 504 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 TRABD2AQ86V40 505 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 FAM131BQ86XD5 332 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 VSIG1Q86XK7 387 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 PCDH19Q8TAB3 1148 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 SLC7A14Q8TBB6 771 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 ADAM32Q8TC27 787 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 PPM1EQ8WY54 764 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 FAF2Q96CS3 445 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 TRIM62Q9BVG3 475 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 ABCC13Q9NSE7 274 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 IL37Q9NZH6 218 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 COX16Q9P0S2 106 aa14.99□□□□□ -0.01
COL5A1-205ENST00000464187 XPO7Q9UIA9 1087 aaKnown RBP14.99□□□□□ -0.01
COL5A1-205ENST00000464187 CDH23Q9H251 3354 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 FAM92AA1XBS5 289 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 GRXCR1A8MXD5 290 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 H7C0C1 242 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 SMAPO00193 183 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 TEX28O15482 410 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 RTN3O95197 1032 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-205ENST00000464187 SEC24AO95486 1093 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 CPP00450 1065 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 MYOGP15173 224 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 YWHAQP27348 245 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 ATP5OP48047 213 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 BASP1P80723 227 aaKnown RBP14.98□□□□□ -0.01
COL5A1-205ENST00000464187 DEUP1Q05D60 604 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 EFHC2Q5JST6 749 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 BTBD8Q5XKL5 378 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 FAM109BQ6ICB4 259 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-205ENST00000464187 BEND5Q7L4P6 421 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 TMC7Q7Z402 723 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 SCD5Q86SK9 330 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 MON1AQ86VX9 555 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 ATP11CQ8NB49 1132 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 CCDC197Q8NCU1 140 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 GDAP1Q8TB36 358 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 GIPC2Q8TF65 315 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 CKAP2Q8WWK9 683 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 ZNF670Q9BS34 389 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 NSRP1Q9H0G5 558 aaKnown RBP14.98□□□□□ -0.01
COL5A1-205ENST00000464187 NMUR1Q9HB89 426 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 CYP4F11Q9HBI6 524 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 USP29Q9HBJ7 922 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 ALG13Q9NP73 1137 aaKnown RBP14.98□□□□□ -0.01
COL5A1-205ENST00000464187 PIGVQ9NUD9 493 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 RRN3Q9NYV6 651 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 FNIP2Q9P278 1114 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 HSFX1Q9UBD0 423 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 SSX2IPQ9Y2D8 614 aa14.98□□□□□ -0.01
COL5A1-205ENST00000464187 A0A1W2PQH9 124 aa14.97□□□□□ -0.01
COL5A1-205ENST00000464187 ZNF487B1APH4 448 aa14.97□□□□□ -0.01
COL5A1-205ENST00000464187 STIP1P31948 543 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms