RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CYB5D2Q8WUJ1 264 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 NT5C3BQ969T7 300 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 NPY6RQ99463 290 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 CD93Q9NPY3 652 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 PIGVQ9NUD9 493 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 MBD1Q9UIS9 605 aaPredicted RBP13.44□□□□□ -0.26
XRN1-203ENST00000463916 GGA2Q9UJY4 613 aa13.44□□□□□ -0.26
XRN1-203ENST00000463916 GOLGA8SH3BPF8 625 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 PABPC1P11940 636 aaKnown RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 TACR2P21452 398 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 PRKCHP24723 683 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 CCR1P32246 355 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 GBP1P32455 592 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 FLT3P36888 993 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 EIF4HQ15056 248 aaKnown RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 PTPRNQ16849 979 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 FAM102AQ5T9C2 384 aaPredicted RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 CHST9Q7L1S5 443 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 PHLDB2Q86SQ0 1253 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 MFN1Q8IWA4 741 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.43□□□□□ -0.26
XRN1-203ENST00000463916 HJURPQ8NCD3 748 aaPredicted RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 FIBINQ8TAL6 211 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 MRGPRX1Q96LB2 322 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 IRX2Q9BZI1 471 aaPredicted RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 CBX8Q9HC52 389 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 SEMA4GQ9NTN9 838 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.43□□□□□ -0.26
XRN1-203ENST00000463916 TMEM59LQ9UK28 342 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 INTS6Q9UL03 887 aaKnown RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 DAAM1Q9Y4D1 1078 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 UNGP13051 313 aaPredicted RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 MMP8P22894 467 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 GGCXP38435 758 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 ATXN1P54253 815 aaKnown RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 LMAN2Q12907 356 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 FUT11Q495W5 492 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 LUZP1Q86V48 1076 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 CHSY1Q86X52 802 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 CIR1Q86X95 450 aaPredicted RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 CARNMT1Q8N4J0 409 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 RNF34Q969K3 372 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 DDX50Q9BQ39 737 aaKnown RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 MKRN2Q9H000 416 aaKnown RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 SMOC1Q9H4F8 434 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 USP18Q9UMW8 372 aa13.43□□□□□ -0.26
XRN1-203ENST00000463916 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.43□□□□□ -0.26
XRN1-203ENST00000463916 TIMM44O43615 452 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 EPN2O95208 641 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 ADCY5O95622 1261 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 HLA-EP13747 358 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 NUMBP49757 651 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 IRAK1P51617 712 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 PTP4A2Q12974 167 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 PMS2CLQ68D20 193 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 MBLAC2Q68D91 279 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 ZNF366Q8N895 744 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 ATP6V0D2Q8N8Y2 350 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 UCMAQ8WVF2 138 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 BAP1Q92560 729 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 RMDN1Q96DB5 314 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 LOXL4Q96JB6 756 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 TBCBQ99426 244 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 TMPRSS4Q9NRS4 437 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 RALGAPA1Q6GYQ0 2036 aa13.42□□□□□ -0.26
XRN1-203ENST00000463916 A0A1B0GTH6 734 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 PAGE1O75459 146 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 LUC7L3O95232 432 aaKnown RBP13.41□□□□□ -0.26
XRN1-203ENST00000463916 GJB6O95452 261 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 SLC2A3P11169 496 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 ABCB4P21439 1286 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 SCNN1AP37088 669 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 CXCR3P49682 368 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 RAB6CQ53S08 254 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 FBXL22Q6P050 247 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 IRF2BP2Q7Z5L9 587 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 C14orf80Q86SX3 495 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 AHI1Q8N157 1196 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 EMC1Q8N766 993 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 IGSF8Q969P0 613 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 CFAP57Q96MR6 1250 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 RAB6CQ9H0N0 254 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 TMEM245Q9H330 911 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 HS3ST4Q9Y661 456 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 THADAQ6YHU6 1953 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 MUC22E2RYF6 1773 aaPredicted RBP13.41□□□□□ -0.26
XRN1-203ENST00000463916 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 NPC1O15118 1278 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 LRP3O75074 770 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 SULT1E1P49888 294 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 CENPCQ03188 943 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 AUHQ13825 339 aaKnown RBP13.41□□□□□ -0.26
XRN1-203ENST00000463916 NR1I3Q14994 352 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 SF3A2Q15428 464 aaKnown RBP13.41□□□□□ -0.26
XRN1-203ENST00000463916 ELF2Q15723 593 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 CSRP2Q16527 193 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 ZSCAN23Q3MJ62 389 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 SLC25A52Q3SY17 297 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 PLA2G2CQ5R387 149 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 SERPINA13PQ6UXR4 307 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms