RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 IPO9Q96P70 1041 aaKnown RBP18.01■□□□□ 0.47
HMGN1-209ENST00000463631 RSPH9Q9H1X1 276 aaPredicted RBP18.01■□□□□ 0.47
HMGN1-209ENST00000463631 LRRC4Q9HBW1 653 aa18.01■□□□□ 0.47
HMGN1-209ENST00000463631 ABCC13Q9NSE7 274 aa18.01■□□□□ 0.47
HMGN1-209ENST00000463631 SCML1Q9UN30 329 aa18.01■□□□□ 0.47
HMGN1-209ENST00000463631 YJEFN3A6XGL0 299 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 E7ENQ6 273 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 IGLV3-27P01718 113 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 IGHV4-34P06331 123 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 CENPBP07199 599 aaPredicted RBP18■□□□□ 0.47
HMGN1-209ENST00000463631 PRR29P0C7W0 189 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 SETSIPP0DME0 302 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 RACK1P63244 317 aaKnown RBP18■□□□□ 0.47
HMGN1-209ENST00000463631 CYP4F3Q08477 520 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 SGO2Q562F6 1265 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 LAYNQ6UX15 382 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 KCTD13Q8WZ19 329 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 BBC3Q96PG8 261 aaPredicted RBP18■□□□□ 0.47
HMGN1-209ENST00000463631 CNGB3Q9NQW8 809 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 HESX1Q9UBX0 185 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 MAPK8IP1Q9UQF2 711 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 PTPRQQ9UMZ3 2332 aa18■□□□□ 0.47
HMGN1-209ENST00000463631 NYNRINQ9P2P1 1898 aaKnown RBP17.99■□□□□ 0.47
HMGN1-209ENST00000463631 C10orf142B7Z368 130 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 VILLO15195 856 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 IRAK2O43187 625 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 MSI1O43347 362 aaKnown RBP17.99■□□□□ 0.47
HMGN1-209ENST00000463631 FSBPO95073 299 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 SGSHP51688 502 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 PKP1Q13835 747 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 ARID5BQ14865 1188 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 KCNT1Q5JUK3 1230 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 SIX6OS1Q8N1H7 587 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 WFDC5Q8TCV5 224 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 NDRG1Q92597 394 aaKnown RBP17.99■□□□□ 0.47
HMGN1-209ENST00000463631 EDEM1Q92611 657 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 TATDN2Q93075 761 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 MYO19Q96H55 970 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 ACE2Q9BYF1 805 aaPredicted RBP17.99■□□□□ 0.47
HMGN1-209ENST00000463631 PABPC3Q9H361 631 aaKnown RBP17.99■□□□□ 0.47
HMGN1-209ENST00000463631 FTSJ1Q9UET6 329 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 SUN2Q9UH99 717 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 SFMBT1Q9UHJ3 866 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 COQ4Q9Y3A0 265 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 PCDHGA1Q9Y5H4 931 aa17.99■□□□□ 0.47
HMGN1-209ENST00000463631 BPTFQ12830 3046 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 A0A1B0GTQ1 180 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 GOLGA8CPA6NN73 597 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 O00370 1275 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 POLR2EP19388 210 aaKnown RBP17.98■□□□□ 0.47
HMGN1-209ENST00000463631 CD70P32970 193 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 SYKP43405 635 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 DAOAP59103 153 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 CUL2Q13617 745 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 HNRNPA1L2Q32P51 320 aaKnown RBP17.98■□□□□ 0.47
HMGN1-209ENST00000463631 PKDCCQ504Y2 493 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 FAM133BQ5BKY9 247 aaKnown RBP17.98■□□□□ 0.47
HMGN1-209ENST00000463631 PIK3R6Q5UE93 754 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 NUGGCQ68CJ6 796 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 KIAA0895LQ68EN5 471 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 ADAT2Q7Z6V5 191 aaKnown RBP17.98■□□□□ 0.47
HMGN1-209ENST00000463631 TMPRSS12Q86WS5 348 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 MARCH9Q86YJ5 346 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 KDM1BQ8NB78 822 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 TTC17Q96AE7 1141 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 LRIG1Q96JA1 1093 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 LMLNQ96KR4 655 aa17.98■□□□□ 0.47
HMGN1-209ENST00000463631 A0A1W2PPC4 97 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 FAM149AA5PLN7 773 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 KCNK3O14649 394 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 ASLP04424 464 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 EPB41P11171 864 aaKnown RBP17.97■□□□□ 0.47
HMGN1-209ENST00000463631 YWHAEP62258 255 aaKnown RBP17.97■□□□□ 0.47
HMGN1-209ENST00000463631 SFSWAPQ12872 951 aaKnown RBP17.97■□□□□ 0.47
HMGN1-209ENST00000463631 DHRS13Q6UX07 377 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 UNC45BQ8IWX7 931 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 UBR7Q8N806 425 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 HJURPQ8NCD3 748 aaPredicted RBP17.97■□□□□ 0.47
HMGN1-209ENST00000463631 IRGQQ8WZA9 623 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 AZIN2Q96A70 460 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 NXPE2Q96DL1 559 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 ADAMTS1Q9UHI8 967 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 KIAA1257Q9ULG3 409 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 NCKAP1Q9Y2A7 1128 aa17.97■□□□□ 0.47
HMGN1-209ENST00000463631 TBL1XO60907 577 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 HSP90AA1P07900 732 aaKnown RBP17.96■□□□□ 0.47
HMGN1-209ENST00000463631 VDRP11473 427 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 CDK4P11802 303 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 SLC6A4P31645 630 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 SLC11A2P49281 568 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 NDUFA8P51970 172 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 C21orf59P57076 290 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 CBWD6Q4V339 395 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 CBWD3Q5JTY5 395 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 CBWD5Q5RIA9 395 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 RFWD3Q6PCD5 774 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 MFN1Q8IWA4 741 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 FIBINQ8TAL6 211 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 EEF2KMTQ96G04 330 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 ELF4Q99607 663 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms