RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SMG5Q9UPR3 1016 aaKnown RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 TIMM13Q9Y5L4 95 aaPredicted RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 CFAP69A5D8W1 941 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 FAM47DPA6NHR8 397 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 CYB561D2O14569 222 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 VIMP08670 466 aaKnown RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 HNRNPA1P09651 372 aaKnown RBP eCLIP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ZSCAN5DPP0CG00 497 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ETS1P14921 441 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 HOXA9P31269 272 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ROR1Q01973 937 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 XRCC4Q13426 336 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 NOMO1Q15155 1222 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 SV2CQ496J9 727 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 BOLA3Q53S33 107 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 FAM102AQ5T9C2 384 aaPredicted RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ARHGAP17Q68EM7 881 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 OVOS1Q6IE37 1185 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 DPH6Q7L8W6 267 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 TMEM110Q86TL2 294 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 MAP7D3Q8IWC1 876 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 GBP7Q8N8V2 638 aaPredicted RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ATP11CQ8NB49 1132 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 RSAD2Q8WXG1 361 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 CPT1BQ92523 772 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 RTP4Q96DX8 246 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ZNF560Q96MR9 790 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 DHRS4Q9BTZ2 278 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 PRKD2Q9BZL6 878 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 CD320Q9NPF0 282 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 GDAP2Q9NXN4 497 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 TSPAN16Q9UKR8 245 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 WDR27A2RRH5 827 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 OR6C75A6NL08 312 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 LOC730098B7Z3J9 87 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 RASA4BC9J798 803 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 H0YHG0 523 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 TNFRSF10AO00220 468 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 RASA4O43374 803 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 RFPL2O75678 378 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 RASSF9O75901 435 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 SUN1O94901 812 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 POU2F2P09086 479 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 CREB1P16220 341 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 DESP17661 470 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 TGM2P21980 687 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 RPL22P35268 128 aaKnown RBP10.24□□□□□ -0.77
PTPRD-207ENST00000463477 SCTRP47872 440 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 RPL34P49207 117 aaKnown RBP10.24□□□□□ -0.77
PTPRD-207ENST00000463477 IL9RQ01113 521 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 PDIA2Q13087 525 aaKnown RBP10.24□□□□□ -0.77
PTPRD-207ENST00000463477 MPP2Q14168 576 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 SMTNL2Q2TAL5 461 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 KLHL38Q2WGJ6 581 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 C4orf22Q6V702 233 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 CCDC149Q6ZUS6 474 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 FAM183BPQ6ZVS7 135 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 PRUNE1Q86TP1 453 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 RFX6Q8HWS3 928 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 SRRM1Q8IYB3 904 aaKnown RBP10.24□□□□□ -0.77
PTPRD-207ENST00000463477 EMC1Q8N766 993 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 DENND1AQ8TEH3 1009 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 RXFP2Q8WXD0 754 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 ZNF707Q96C28 371 aaPredicted RBP10.24□□□□□ -0.77
PTPRD-207ENST00000463477 ACSS3Q9H6R3 686 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 KCNK9Q9NPC2 374 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 PSMC3IPQ9P2W1 217 aaPredicted RBP10.24□□□□□ -0.77
PTPRD-207ENST00000463477 AFF4Q9UHB7 1163 aaKnown RBP10.24□□□□□ -0.77
PTPRD-207ENST00000463477 SLC12A4Q9UP95 1085 aa10.24□□□□□ -0.77
PTPRD-207ENST00000463477 MTCL1Q9Y4B5 1905 aaKnown RBP10.23□□□□□ -0.77
PTPRD-207ENST00000463477 TCP11X1B4DZS4 312 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 MDM4O15151 490 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 PRPSAP2O60256 369 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 SPAG6O75602 509 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 ASMTLO95671 621 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 IFNB1P01574 187 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 C8AP07357 584 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 FAM163BP0C2L3 166 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 RBP3P10745 1247 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 PDGFRAP16234 1089 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 ELF1P32519 619 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 STX2P32856 288 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 MAGEA6P43360 314 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 IFNAR2P48551 515 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 EIF3EP60228 445 aaKnown RBP10.23□□□□□ -0.77
PTPRD-207ENST00000463477 GPR17Q13304 367 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 DPYSL3Q14195 570 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 TMED2Q15363 201 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 KCNT1Q5JUK3 1230 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 PPM1LQ5SGD2 360 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 WSCD1Q658N2 575 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 TRNP1Q6NT89 227 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 ADGRD1Q6QNK2 874 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 OLFML1Q6UWY5 402 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 TRPM8Q7Z2W7 1104 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 METTL23Q86XA0 190 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 TCEAL8Q8IYN2 117 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 ZBED8Q8IZ13 594 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 THEM5Q8N1Q8 247 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 SPATA18Q8TC71 538 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms