RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 ASTE1Q2TB18 679 aaPredicted RBP16.17■□□□□ 0.18
SMC4-204ENST00000462787 HYIQ5T013 277 aa16.17■□□□□ 0.18
SMC4-204ENST00000462787 KCNMB4Q86W47 210 aa16.17■□□□□ 0.18
SMC4-204ENST00000462787 CRAMP1Q96RY5 1269 aa16.17■□□□□ 0.18
SMC4-204ENST00000462787 FAM86B1E9PN63 330 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 HDAC3O15379 428 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 TCEA3O75764 348 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 ASMTLO95671 621 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 CD4P01730 458 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 PDGFRBP09619 1106 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 FAM86B2P0C5J1 330 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 VEGFAP15692 232 aaPredicted RBP16.16■□□□□ 0.18
SMC4-204ENST00000462787 PSEN1P49768 467 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 CCT8P50990 548 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 RAD51Q06609 339 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 SPP2Q13103 211 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 PERM1Q5SV97 790 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 SCARA3Q6AZY7 606 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 GMCL1P1Q8NEA9 526 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 VPS37AQ8NEZ2 397 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 SPOCK2Q92563 424 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 RMND5AQ9H871 391 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 KLHL3Q9UH77 587 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 VPS4BO75351 444 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 ZNF12P17014 697 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 PURAQ00577 322 aaKnown RBP16.16■□□□□ 0.18
SMC4-204ENST00000462787 SQLEQ14534 574 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 CCDC142Q17RM4 750 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 ACSBG2Q5FVE4 666 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 BBS12Q6ZW61 710 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 SAMD3Q8N6K7 520 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 TMEM176AQ96HP8 235 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 ZDHHC18Q9NUE0 388 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 RNF112Q9ULX5 631 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 ASTN2O75129 1339 aaPredicted RBP16.16■□□□□ 0.18
SMC4-204ENST00000462787 UPP2O95045 317 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 MIPP30301 263 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 C8orf4Q9NR00 106 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 VPS45Q9NRW7 570 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 CDH22Q9UJ99 828 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 TSR3Q9UJK0 312 aaKnown RBP16.16■□□□□ 0.18
SMC4-204ENST00000462787 NID2Q14112 1375 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 hCG_1818297A0A087WSY0 165 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 TCRBV9S1A1TA0A576 114 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 CD151P48509 253 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 EMC10Q5UCC4 262 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 STRIP1Q5VSL9 837 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 TWF2Q6IBS0 349 aaKnown RBP16.16■□□□□ 0.18
SMC4-204ENST00000462787 PACS1Q6VY07 963 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 TMEM26Q6ZUK4 368 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 POLNQ7Z5Q5 900 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 TLK2Q86UE8 772 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 DGCR6LQ9BY27 220 aa16.16■□□□□ 0.18
SMC4-204ENST00000462787 MST1RQ04912 1400 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 RAD51BO15315 384 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 VAC14Q08AM6 782 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 GRIK3Q13003 919 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 DNAAF2Q9NVR5 837 aaKnown RBP16.15■□□□□ 0.18
SMC4-204ENST00000462787 GNEQ9Y223 722 aaKnown RBP16.15■□□□□ 0.18
SMC4-204ENST00000462787 PLLPQ9Y342 182 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 PKP3Q9Y446 797 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 PXDNQ92626 1479 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 LINC00854A0A1B0GVQ3 168 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 FAM25AB3EWG3 89 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 FAM25CB3EWG5 89 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 FAM25GB3EWG6 89 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 C5orf58C9J3I9 102 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 DNAJB2P25686 324 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 PIK3R1P27986 724 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 TP53BP2Q13625 1128 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 NFIXQ14938 502 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 VSTM1Q6UX27 236 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 CHSY1Q86X52 802 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 PHF13Q86YI8 300 aaPredicted RBP16.15■□□□□ 0.18
SMC4-204ENST00000462787 MAP4K3Q8IVH8 894 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 ASB2Q96Q27 587 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 VTA1Q9NP79 307 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 DIABLOQ9NR28 239 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 ZNF180Q9UJW8 692 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 TMA7Q9Y2S6 64 aaKnown RBP16.15■□□□□ 0.18
SMC4-204ENST00000462787 RAP2CQ9Y3L5 183 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 PTGES3LE9PB15 166 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 IDH3BO43837 385 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 HIST1H2AGP0C0S8 130 aaPredicted RBP16.15■□□□□ 0.18
SMC4-204ENST00000462787 HIST1H2ADP20671 130 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 RBL1P28749 1068 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 GRIA3P42263 894 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 HADHBP55084 474 aaKnown RBP16.15■□□□□ 0.18
SMC4-204ENST00000462787 NAA20P61599 178 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 CDC16Q13042 620 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 ADGRD1Q6QNK2 874 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 SATL1Q86VE3 508 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 HIST1H2AHQ96KK5 128 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 HIST1H2AJQ99878 128 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 MTG1Q9BT17 334 aaPredicted RBP16.15■□□□□ 0.18
SMC4-204ENST00000462787 H2AFJQ9BTM1 129 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 SPON2Q9BUD6 331 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 POLG2Q9UHN1 485 aa16.15■□□□□ 0.18
SMC4-204ENST00000462787 CYP3A7-CYP3A51PA0A087WV96 503 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 M0QYT0 321 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms