RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 SWSAP1Q6NVH7 229 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 ARMC6Q6NXE6 501 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 Q6ZRM9 215 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 MED25Q71SY5 747 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 LRRC8DQ7L1W4 858 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 ASCL5Q7RTU5 278 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 RPAINQ86UA6 219 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 SYT12Q8IV01 421 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 TNPO1Q92973 898 aaKnown RBP5.52□□□□□ -1.53
COPS3-204ENST00000462236 MSLNLQ96KJ4 702 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 PNKPQ96T60 521 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 DPH1Q9BZG8 443 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 WDR11Q9BZH6 1224 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 RNPEPQ9H4A4 650 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.52□□□□□ -1.53
COPS3-204ENST00000462236 MTMR4Q9NYA4 1195 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 USP25Q9UHP3 1055 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 MTUS1Q9ULD2 1270 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 NEU2Q9Y3R4 380 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 SDK1Q7Z5N4 2213 aa5.52□□□□□ -1.53
COPS3-204ENST00000462236 CEP295Q9C0D2 2601 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 CDHR4A6H8M9 788 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 PRR23AA6NEV1 266 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 HAS3O00219 553 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 PEX11BO96011 259 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 MYL3P08590 195 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 AVPR2P30518 371 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 NBL1P41271 181 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 NOVP48745 357 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 ALDH5A1P51649 535 aaPredicted RBP5.51□□□□□ -1.53
COPS3-204ENST00000462236 SOX8P57073 446 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 NHLH2Q02577 135 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 PIGFQ07326 219 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 SIGLEC14Q08ET2 396 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 HYAL1Q12794 435 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 PTGISQ16647 500 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.51□□□□□ -1.53
COPS3-204ENST00000462236 OR6J1Q8NGC5 347 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 TBC1D15Q8TC07 691 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 SLC46A2Q9BY10 475 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 TRIM54Q9BYV2 358 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 ARPP21Q9UBL0 812 aaPredicted RBP5.51□□□□□ -1.53
COPS3-204ENST00000462236 CLIP2Q9UDT6 1046 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 EIF2B4Q9UI10 523 aaKnown RBP5.51□□□□□ -1.53
COPS3-204ENST00000462236 ST6GALNAC2Q9UJ37 374 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 PCDHA6Q9UN73 950 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 TSC22D4Q9Y3Q8 395 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 CHST2Q9Y4C5 530 aa5.51□□□□□ -1.53
COPS3-204ENST00000462236 TMEM232C9JQI7 657 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 AGFG2O95081 481 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 AHSGP02765 367 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 ITGB1P05556 798 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 SLC7A1P30825 629 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 HOXC8P31273 242 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 STAT2P52630 851 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 NOMO3P69849 1222 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 GPM6BQ13491 265 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 CAMK1Q14012 370 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 RABL3Q5HYI8 236 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 ZNF618Q5T7W0 954 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 GDF7Q7Z4P5 450 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 AACSQ86V21 672 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 FAM160B2Q86V87 743 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 FAM9BQ8IZU0 186 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 TMEM57Q8N5G2 664 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 SMRP1Q8NCR6 262 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 OR6B3Q8NGW1 331 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 CHURC1Q8WUH1 139 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 PHKBQ93100 1093 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 TOP1MTQ969P6 601 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 C8orf49Q96NF6 230 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 NT5C1BQ96P26 610 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 FSD1Q9BTV5 496 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 KRTAP17-1Q9BYP8 105 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 LMAN2LQ9H0V9 348 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 KIAA1586Q9HCI6 787 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 KLHL11Q9NVR0 708 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 PARPBPQ9NWS1 579 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 PLEKHM1Q9Y4G2 1056 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 PATJQ8NI35 1801 aa5.5□□□□□ -1.53
COPS3-204ENST00000462236 LAMA4Q16363 1823 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 LEFTY2O00292 366 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 SOAT2O75908 522 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 TTLL1O95922 423 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 ICAM1P05362 532 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 RB1P06400 928 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 MMP3P08254 477 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 SLC6A2P23975 617 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 APOBEC3AP31941 199 aaPredicted RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 KCNJ5P48544 419 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 ARHGAP1Q07960 439 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 ZNF844Q08AG5 666 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 COASYQ13057 564 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 OS9Q13438 667 aaPredicted RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 BAATQ14032 418 aaPredicted RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 TOB2Q14106 344 aaPredicted RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 PPP2R5BQ15173 497 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 CNGA2Q16280 664 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 LCE1DQ5T752 114 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms