RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ZNF165P49910 485 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 CLCNKBP51801 687 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 CORO7P57737 925 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 GSDMDP57764 484 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 NLRP12P59046 1061 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 LRRC63Q05C16 580 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 SPAG1Q07617 926 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 PAK1Q13153 545 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 ADAM9Q13443 819 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 SNRNP35Q16560 246 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 SLC10A6Q3KNW5 377 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 DPCR1Q3MIW9 517 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 GPR158Q5T848 1215 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 NAIF1Q69YI7 327 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 ANKRD40Q6AI12 368 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 TRIM68Q6AZZ1 485 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 CENPPQ6IPU0 288 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 CRELD2Q6UXH1 353 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 ALKAL1Q6UXT8 129 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 BTLAQ7Z6A9 289 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 KIAA1328Q86T90 577 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 CBWD2Q8IUF1 395 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 CD302Q8IX05 232 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 C12orf56Q8IXR9 622 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 RBM12BQ8IXT5 1001 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 ZSWIM2Q8NEG5 633 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 MDGA1Q8NFP4 955 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 CCDC26Q8TAB7 109 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 SETD7Q8WTS6 366 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 NELFBQ8WX92 580 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 EZH1Q92800 747 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 MIEF2Q96C03 454 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 WBP1Q96G27 269 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 DEPDC7Q96QD5 511 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 SRPK1Q96SB4 655 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 TRIM56Q9BRZ2 755 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 NT5C1AQ9BXI3 368 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 ATXN3LQ9H3M9 355 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 ASB7Q9H672 318 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 PCDH12Q9NPG4 1184 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 KCNK4Q9NYG8 393 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 RBAKQ9NYW8 714 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 PCOLCE2Q9UKZ9 415 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 PPM1HQ9ULR3 514 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 SRPK3Q9UPE1 567 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 KIAA1549LQ6ZVL6 1849 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 MYH10P35580 1976 aa6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 MUC22E2RYF6 1773 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-204ENST00000462198 CABIN1Q9Y6J0 2220 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 A0A087WUV0 522 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 TTC26A0AVF1 554 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 TRIM49BA6NDI0 452 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 LACTBL1A8MY62 500 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 E9PAM4 449 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 H7C4K7 107 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 TMEM189-UBE2V1I3L0A0 370 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 CETN3O15182 167 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 GREM1O60565 184 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 ALDH1A2O94788 518 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 PRAMEF12O95522 483 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 ADRB2P07550 413 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 DLATP10515 647 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 HLA-EP13747 358 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 KCNE1P15382 129 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 GJA4P35212 333 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 ACTN2P35609 894 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 PSMC2P35998 433 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 PEX19P40855 299 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 IL12RB1P42701 662 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 EPHB3P54753 998 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 STX17P56962 302 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 CXADRP78310 365 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 TFAMQ00059 246 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 FKBP3Q00688 224 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 POU5F1Q01860 360 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 SEMG2Q02383 582 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 BYSLQ13895 437 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 LY6DQ14210 128 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 TMEM132DQ14C87 1099 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 SURF1Q15526 300 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 STX1AQ16623 288 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 NFIL3Q16649 462 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 TPD52L1Q16890 204 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 EDRF1Q3B7T1 1238 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 ZCWPW2Q504Y3 356 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 C2orf27AQ580R0 203 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 XKR4Q5GH76 650 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 LMBRD2Q68DH5 695 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 JADE1Q6IE81 842 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 GBP6Q6ZN66 633 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 GAREM2Q75VX8 874 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 RABEPKQ7Z6M1 372 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 USP37Q86T82 979 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 TMC8Q8IU68 726 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 RELL1Q8IUW5 271 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 BRSK2Q8IWQ3 736 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 CCDC33Q8N5R6 958 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 CSGALNACT2Q8N6G5 542 aa6.3□□□□□ -1.4
SMARCC1-204ENST00000462198 USP33Q8TEY7 942 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms