RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CYB5D2Q8WUJ1 264 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 SORCS1Q8WY21 1168 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 SKA1Q96BD8 255 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 PIWIL1Q96J94 861 aaKnown RBP9.2□□□□□ -0.94
LDB1-203ENST00000461873 PPP1R13BQ96KQ4 1090 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 BTN2A3PQ96KV6 586 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 KREMEN1Q96MU8 473 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 TUBGCP2Q9BSJ2 902 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 ZDHHC5Q9C0B5 715 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 BTBD1Q9H0C5 482 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 LHX5Q9H2C1 402 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 CLSTN2Q9H4D0 955 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 ITM2CQ9NQX7 267 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 RXFP3Q9NSD7 469 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 TMEM51Q9NW97 253 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 KIAA1522Q9P206 1035 aaPredicted RBP9.2□□□□□ -0.94
LDB1-203ENST00000461873 MBD1Q9UIS9 605 aaPredicted RBP9.2□□□□□ -0.94
LDB1-203ENST00000461873 STOML2Q9UJZ1 356 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 DNAJC12Q9UKB3 198 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 PILRBQ9UKJ0 227 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 NAALADL1Q9UQQ1 740 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 DNAH14Q0VDD8 3507 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 PI4KAP42356 2102 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 CEP250Q9BV73 2442 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 A0A1B0GTW7 788 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 GOLGA6L7A0A1B0GV03 622 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 E5RJQ4 531 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 ARHGAP33O14559 1287 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 HSF2BPO75031 334 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 TRUB2O95900 331 aaKnown RBP9.19□□□□□ -0.94
LDB1-203ENST00000461873 CALCAP01258 141 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 GLI1P08151 1106 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 HLA-FP30511 346 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 ZBTB16Q05516 673 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 SULT2A1Q06520 285 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 ZNF252P-AS1Q0IIN9 211 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 NME3Q13232 169 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 PDCLQ13371 301 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 SYCP1Q15431 976 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 CT47A1Q5JQC4 288 aaPredicted RBP9.19□□□□□ -0.94
LDB1-203ENST00000461873 FKBP15Q5T1M5 1219 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 N4BP2L1Q5TBK1 243 aaPredicted RBP9.19□□□□□ -0.94
LDB1-203ENST00000461873 TTC39BQ5VTQ0 682 aaPredicted RBP9.19□□□□□ -0.94
LDB1-203ENST00000461873 DCAF12L1Q5VU92 463 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 ZNF776Q68DI1 518 aaPredicted RBP9.19□□□□□ -0.94
LDB1-203ENST00000461873 SMYD5Q6GMV2 418 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 SASS6Q6UVJ0 657 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 IL27RAQ6UWB1 636 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 C11orf57Q6ZUT1 292 aaPredicted RBP9.19□□□□□ -0.94
LDB1-203ENST00000461873 BEND5Q7L4P6 421 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 ZDHHC17Q8IUH5 632 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 PASD1Q8IV76 773 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 LGI2Q8N0V4 545 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 TMEM35BQ8NCS4 154 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 FIBINQ8TAL6 211 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 DQX1Q8TE96 717 aaKnown RBP9.19□□□□□ -0.94
LDB1-203ENST00000461873 OMDQ99983 421 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 SLC6A17Q9H1V8 727 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 NDST4Q9H3R1 872 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 LMBRD1Q9NUN5 540 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 TMEM74BQ9NUR3 256 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 DDIT4Q9NX09 232 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 RRN3Q9NYV6 651 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 STAP1Q9ULZ2 295 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 SCML1Q9UN30 329 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 CNTN6Q9UQ52 1028 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 PLXND1Q9Y4D7 1925 aa9.19□□□□□ -0.94
LDB1-203ENST00000461873 FAM47DPA6NHR8 397 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 KCNJ18B7U540 433 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 BCAT2O15382 392 aaPredicted RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 LUC7L3O95232 432 aaKnown RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 CER1O95813 267 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 SRPRAP08240 638 aaKnown RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 HLA-EP13747 358 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 ZNF18P17022 549 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 DESP17661 470 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 CDK11BP21127 795 aaKnown RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 CSRP1P21291 193 aaKnown RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 TACR2P21452 398 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 PRKCHP24723 683 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 EEF1GP26641 437 aaKnown RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 PON1P27169 355 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 TPMTP51580 245 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 RNASE9P60153 205 aaKnown RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 FOXC1Q12948 553 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 SLC12A1Q13621 1099 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 KCNJ12Q14500 433 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 SUZ12Q15022 739 aaKnown RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 ACCSLQ4AC99 568 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 HSP90AA4PQ58FG1 418 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 ZC3H12AQ5D1E8 599 aaKnown RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 MS4A13Q5J8X5 152 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 RAP1GAP2Q684P5 730 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 GJB7Q6PEY0 223 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 LRRC31Q6UY01 552 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 CLEC17AQ6ZS10 378 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 BHLHA9Q7RTU4 235 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 DSG4Q86SJ6 1040 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 TMEM110Q86TL2 294 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 TAC4Q86UU9 113 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms