RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 PRAMEF2O60811 474 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 GCATO75600 419 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 TJP3O95049 919 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 RTN3O95197 1032 aaPredicted RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 CYP3A4P08684 503 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 CSF1P09603 554 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 CHN1P15882 459 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 MAKP20794 623 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 FPR3P25089 353 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 GGT5P36269 586 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 RXRGP48443 463 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 VPS41P49754 854 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 AGTR2P50052 363 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 CCT8P50990 548 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 EIF5P55010 431 aaKnown RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 NAP1L1P55209 391 aaKnown RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 GPC5P78333 572 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 PSG6Q00889 435 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 GALNT2Q10471 571 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 TBL3Q12788 808 aaKnown RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 FOXE3Q13461 319 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 TDGQ13569 410 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 ALKBH1Q13686 389 aaKnown RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 THOC5Q13769 683 aaKnown RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 GPR162Q16538 588 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 AARS2Q5JTZ9 985 aaKnown RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 TMEM63BQ5T3F8 832 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 NAA35Q5VZE5 725 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 LAIR1Q6GTX8 287 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 ACAD10Q6JQN1 1059 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 DENND1BQ6P3S1 775 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 TMEM88Q6PEY1 159 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 TMEM65Q6PI78 240 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 CRIP3Q6Q6R5 217 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 SLC22A25Q6T423 547 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 NAPRTQ6XQN6 538 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 C1orf122Q6ZSJ8 110 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 RHOUQ7L0Q8 258 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 TBC1D1Q86TI0 1168 aaPredicted RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 ARMC8Q8IUR7 673 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 C16orf71Q8IYS4 520 aaPredicted RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 SLC16A11Q8NCK7 471 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 MAFAQ8NHW3 353 aaPredicted RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 CLEC4CQ8WTT0 213 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 AKAP1Q92667 903 aaKnown RBP eCLIP3.5□□□□□ -1.85
VCL-203ENST00000461383 COQ10AQ96MF6 247 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 SNX18Q96RF0 628 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 CD180Q99467 661 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 HTATIP2Q9BUP3 242 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 FSD1LQ9BXM9 530 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 TRIM2Q9C040 744 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 STN1Q9H668 368 aaKnown RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 SYNPO2LQ9H987 977 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 RCE1Q9Y256 329 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 LAS1LQ9Y4W2 734 aaKnown RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 ENTPD2Q9Y5L3 495 aa3.5□□□□□ -1.85
VCL-203ENST00000461383 COPG1Q9Y678 874 aaKnown RBP3.5□□□□□ -1.85
VCL-203ENST00000461383 MAST3O60307 1309 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 DYTNA2CJ06 578 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 CYR61O00622 381 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 SYN3O14994 580 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 FYB1O15117 783 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 SPTLC2O15270 562 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 LDHCP07864 332 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 ACP5P13686 325 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 CAPN3P20807 821 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 TACR2P21452 398 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 PCSK6P29122 969 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 WDR5P61964 334 aaKnown RBP3.49□□□□□ -1.85
VCL-203ENST00000461383 CFHR3Q02985 330 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 CDK18Q07002 472 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 FOXD4Q12950 439 aaPredicted RBP3.49□□□□□ -1.85
VCL-203ENST00000461383 KRT32Q14532 448 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 MFSD13AQ14CX5 517 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 NAA25Q14CX7 972 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 CC2D1BQ5T0F9 858 aaKnown RBP3.49□□□□□ -1.85
VCL-203ENST00000461383 SLC9C2Q5TAH2 1124 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 HAUS3Q68CZ6 603 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 KIAA0895LQ68EN5 471 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 MZT2BQ6NZ67 158 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 KIAA1324Q6UXG2 1013 aaKnown RBP3.49□□□□□ -1.85
VCL-203ENST00000461383 SERPINA13PQ6UXR4 307 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 SLC39A5Q6ZMH5 540 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 DCDC5Q6ZRR9 648 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 ADGRG6Q86SQ4 1221 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 CHD1LQ86WJ1 897 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 Q8N1X5 172 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 TERB1Q8NA31 727 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 RFFLQ8WZ73 363 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 ZBTB10Q96DT7 871 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 KIF1BPQ96EK5 621 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 DAZAP1Q96EP5 407 aaKnown RBP3.49□□□□□ -1.85
VCL-203ENST00000461383 ZNF503Q96F45 646 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 TRMT61AQ96FX7 289 aaKnown RBP3.49□□□□□ -1.85
VCL-203ENST00000461383 APOPT1Q96IL0 206 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 CCDC17Q96LX7 622 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 TIGD1Q96MW7 591 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 HERC2P3Q9BVR0 1158 aa3.49□□□□□ -1.85
VCL-203ENST00000461383 RNF26Q9BY78 433 aaPredicted RBP3.49□□□□□ -1.85
VCL-203ENST00000461383 TRIM31Q9BZY9 425 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms