RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 NOCTQ9UK39 431 aaKnown RBP15.96■□□□□ 0.15
VARS-219ENST00000461328 SDK1Q7Z5N4 2213 aa15.96■□□□□ 0.15
VARS-219ENST00000461328 MYO18AQ92614 2054 aaKnown RBP15.96■□□□□ 0.15
VARS-219ENST00000461328 DCHS1Q96JQ0 3298 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 WASH3PC4AMC7 463 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 SLC30A4O14863 429 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 SLC2A3P11169 496 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 NDUFV2P19404 249 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 ABCB4P21439 1286 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 SLC6A4P31645 630 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 SGSHP51688 502 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 NOMO3P69849 1222 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 NME3Q13232 169 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 SKOR2Q2VWA4 1001 aaPredicted RBP15.95■□□□□ 0.14
VARS-219ENST00000461328 FAM133BQ5BKY9 247 aaKnown RBP15.95■□□□□ 0.14
VARS-219ENST00000461328 PIK3R6Q5UE93 754 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 NADSYN1Q6IA69 706 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 TRIM72Q6ZMU5 477 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 ARMCX6Q7L4S7 300 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 TMEFF1Q8IYR6 380 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 ATP6V0D2Q8N8Y2 350 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 SORCS1Q8WY21 1168 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 AZIN2Q96A70 460 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 SLC39A13Q96H72 371 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 NUCKS1Q9H1E3 243 aaKnown RBP15.95■□□□□ 0.14
VARS-219ENST00000461328 CD248Q9HCU0 757 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 THAP10Q9P2Z0 257 aaPredicted RBP15.95■□□□□ 0.14
VARS-219ENST00000461328 MBD1Q9UIS9 605 aaPredicted RBP15.95■□□□□ 0.14
VARS-219ENST00000461328 STAP1Q9ULZ2 295 aa15.95■□□□□ 0.14
VARS-219ENST00000461328 DCDC2BA2VCK2 349 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 GOLGA6L19H0YKK7 550 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 TEX33O43247 280 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 TIMM44O43615 452 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 SYNCRIPO60506 623 aaKnown RBP15.94■□□□□ 0.14
VARS-219ENST00000461328 ZNF217O75362 1048 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 IGLV3-25P01717 112 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 HLA-FP30511 346 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 CCR1P32246 355 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 NOS2P35228 1153 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 IL12RB1P42701 662 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 SULT1E1P49888 294 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 ZNF234Q14588 700 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 ZSCAN23Q3MJ62 389 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 C2CD6Q53TS8 623 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 RAP1GAP2Q684P5 730 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 TCEAL6Q6IPX3 200 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 KIAA1324Q6UXG2 1013 aaKnown RBP15.94■□□□□ 0.14
VARS-219ENST00000461328 SLC36A4Q6YBV0 504 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 MMS22LQ6ZRQ5 1243 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 CHST9Q7L1S5 443 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 LUZP1Q86V48 1076 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 MFN1Q8IWA4 741 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 LGI2Q8N0V4 545 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 ZNF397Q8NF99 534 aaPredicted RBP15.94■□□□□ 0.14
VARS-219ENST00000461328 WFIKKN2Q8TEU8 576 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 PIGKQ92643 395 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 TCEAL3Q969E4 200 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 BTN2A3PQ96KV6 586 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 MRGPRX1Q96LB2 322 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 PRICKLE1Q96MT3 831 aaPredicted RBP15.94■□□□□ 0.14
VARS-219ENST00000461328 IRX2Q9BZI1 471 aaPredicted RBP15.94■□□□□ 0.14
VARS-219ENST00000461328 SLC6A17Q9H1V8 727 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 CBX8Q9HC52 389 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 RTN4Q9NQC3 1192 aaKnown RBP15.94■□□□□ 0.14
VARS-219ENST00000461328 RXFP3Q9NSD7 469 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 ABCB8Q9NUT2 735 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.94■□□□□ 0.14
VARS-219ENST00000461328 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.14
VARS-219ENST00000461328 XPO7Q9UIA9 1087 aaKnown RBP15.94■□□□□ 0.14
VARS-219ENST00000461328 GGA2Q9UJY4 613 aa15.94■□□□□ 0.14
VARS-219ENST00000461328 THADAQ6YHU6 1953 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 F5H5T6 163 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 M0QYT0 321 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 AP5Z1O43299 807 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 CCDC172P0C7W6 258 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 PABPC1P11940 636 aaKnown RBP15.93■□□□□ 0.14
VARS-219ENST00000461328 MATKP42679 507 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 NSFP46459 744 aaKnown RBP15.93■□□□□ 0.14
VARS-219ENST00000461328 RPS24P62847 133 aaKnown RBP15.93■□□□□ 0.14
VARS-219ENST00000461328 FMO1Q01740 532 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 RPL6Q02878 288 aaKnown RBP15.93■□□□□ 0.14
VARS-219ENST00000461328 CDH18Q13634 790 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 ENPP2Q13822 863 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 IQCB1Q15051 598 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 FUT11Q495W5 492 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 MS4A13Q5J8X5 152 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 MPP7Q5T2T1 576 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 LYSMD4Q5XG99 296 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 TMEM215Q68D42 235 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 IL31Q6EBC2 164 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 SERPINA13PQ6UXR4 307 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 SND1Q7KZF4 910 aaKnown RBP eCLIP15.93■□□□□ 0.14
VARS-219ENST00000461328 XYLT1Q86Y38 959 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 AHI1Q8N157 1196 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 CARNMT1Q8N4J0 409 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 ZNF557Q8N988 423 aaPredicted RBP15.93■□□□□ 0.14
VARS-219ENST00000461328 RRN3Q9NYV6 651 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 CYP8B1Q9UNU6 501 aa15.93■□□□□ 0.14
VARS-219ENST00000461328 IGHV1OR15-9A0A0B4J2B8 117 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms