RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PNMA2Q9UL42 364 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 PCDHGB6Q9Y5F9 930 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 GRIN2DO15399 1336 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 CACNA1BQ00975 2339 aa5.22□□□□□ -1.57
ATPAF1-203ENST00000460928 WDR81Q562E7 1941 aa5.21□□□□□ -1.57
ATPAF1-203ENST00000460928 A0A0G2JNJ9 132 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 PP2D1A8MPX8 630 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 STX6O43752 255 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 FOSP01100 380 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 ASGR1P07306 291 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 MMP3P08254 477 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 CYP3A4P08684 503 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 XPAP23025 273 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 MARK3P27448 753 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 CDC25AP30304 524 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 ADCY8P40145 1251 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 AGFG1P52594 562 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 FOXL1Q12952 345 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 TRAF1Q13077 416 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 PCOLCEQ15113 449 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 PDCD2Q16342 344 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 UGCGQ16739 394 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 LONRF1Q17RB8 773 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 LRRC26Q2I0M4 334 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 LSM12Q3MHD2 195 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 DUSP28Q4G0W2 176 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 ANO6Q4KMQ2 910 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 CELF3Q5SZQ8 465 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 RNF220Q5VTB9 566 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 CAVIN1Q6NZI2 390 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 KLHDC10Q6PID8 442 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 CLEC17AQ6ZS10 378 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 NEK8Q86SG6 692 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 C1orf210Q8IVY1 113 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 TDHQ8IZJ6 230 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 C4orf32Q8N8J7 132 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 IQUBQ8NA54 791 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 KLHDC9Q8NEP7 349 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 ANKRD20A12PQ8NF67 263 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 IL17DQ8TAD2 202 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 BICD2Q8TD16 824 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 SCFD2Q8WU76 684 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 CCDC12Q8WUD4 166 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 CACTINQ8WUQ7 758 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 TRAPPC12Q8WVT3 735 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 WASF1Q92558 559 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 KAT2BQ92831 832 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 HIST1H2AHQ96KK5 128 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 SPATA33Q96N06 139 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 CGRRF1Q99675 332 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 HIST1H2AJQ99878 128 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 ZNF577Q9BSK1 485 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 ADI1Q9BV57 179 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 SENP6Q9GZR1 1112 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 OR10A5Q9H207 317 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 C12orf65Q9H3J6 166 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 UNC45AQ9H3U1 944 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 ZNF703Q9H7S9 590 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 PPCSQ9HAB8 311 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 POLD4Q9HCU8 107 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 PLCB1Q9NQ66 1216 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 AURKAIP1Q9NWT8 199 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 KCMF1Q9P0J7 381 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 Q9UFV3 132 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 DDX25Q9UHL0 483 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 SCOCQ9UIL1 159 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 OGDHLQ9ULD0 1010 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 CLIC4Q9Y696 253 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 V9GYY5 206 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 ZDBF2Q9HCK1 2354 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 TCHHQ07283 1943 aa5.21□□□□□ -1.58
ATPAF1-203ENST00000460928 CAPN8A6NHC0 703 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 IPO5O00410 1097 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 FIBPO43427 364 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 NRP2O60462 931 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 DUSP11O75319 330 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 GH1P01241 217 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 XBP1P17861 261 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 PAX7P23759 505 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 U2AF2P26368 475 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 MARCKSP29966 332 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 ICAM3P32942 547 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 CIITAP33076 1130 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 PEX19P40855 299 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 ACLYP53396 1101 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 ACTR2P61160 394 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 HGFACQ04756 655 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 DPTQ07507 201 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 GPS2Q13227 327 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 IL10RAQ13651 578 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 TTC31Q49AM3 519 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 SPECC1Q5M775 1068 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 TEX35Q5T0J7 233 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 C1orf228Q6PIY5 440 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 USP49Q70CQ1 688 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 ADGRE4PQ86SQ3 457 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 DAAM2Q86T65 1068 aa5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 CCDC60Q8IWA6 550 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-203ENST00000460928 ZNF808Q8N4W9 903 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms