RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ZDHHC5Q9C0B5 715 aa23.65■■□□□ 1.38
PTPN4-207ENST00000460162 LHX5Q9H2C1 402 aa23.65■■□□□ 1.38
PTPN4-207ENST00000460162 NAALADL1Q9UQQ1 740 aa23.65■■□□□ 1.38
PTPN4-207ENST00000460162 NYNRINQ9P2P1 1898 aaKnown RBP23.64■■□□□ 1.38
PTPN4-207ENST00000460162 A0A1B0GTW7 788 aa23.64■■□□□ 1.37
PTPN4-207ENST00000460162 GOLGA6L7A0A1B0GV03 622 aa23.64■■□□□ 1.37
PTPN4-207ENST00000460162 THAP12O43422 761 aa23.64■■□□□ 1.37
PTPN4-207ENST00000460162 POLR2EP19388 210 aaKnown RBP23.64■■□□□ 1.37
PTPN4-207ENST00000460162 CD70P32970 193 aa23.64■■□□□ 1.37
PTPN4-207ENST00000460162 SMYD5Q6GMV2 418 aa23.64■■□□□ 1.37
PTPN4-207ENST00000460162 TAC4Q86UU9 113 aa23.64■■□□□ 1.37
PTPN4-207ENST00000460162 ZNF606Q8WXB4 792 aa23.64■■□□□ 1.37
PTPN4-207ENST00000460162 APEX2Q9UBZ4 518 aa23.64■■□□□ 1.37
PTPN4-207ENST00000460162 WASF3Q9UPY6 502 aa23.64■■□□□ 1.37
PTPN4-207ENST00000460162 GTPBP10A4D1E9 387 aaKnown RBP23.63■■□□□ 1.37
PTPN4-207ENST00000460162 METTL12A8MUP2 240 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 E5RJQ4 531 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 CAPN9O14815 690 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 PAPSS1O43252 624 aaPredicted RBP23.63■■□□□ 1.37
PTPN4-207ENST00000460162 ZBTB16Q05516 673 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 SLC14A1Q13336 389 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 DCAF12L1Q5VU92 463 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 TMEM110Q86TL2 294 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 ZCCHC9Q8N567 271 aaKnown RBP23.63■■□□□ 1.37
PTPN4-207ENST00000460162 FIBINQ8TAL6 211 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 CRACR2AQ9BSW2 395 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 POPDC2Q9HBU9 364 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 PCNX2A6NKB5 2137 aa23.63■■□□□ 1.37
PTPN4-207ENST00000460162 FRYQ5TBA9 3013 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 APOEP02649 317 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 MAOBP27338 520 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 GRIK2Q13002 908 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 PDCLQ13371 301 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 CDH18Q13634 790 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 CAMK4Q16566 473 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 MS4A13Q5J8X5 152 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 GBP6Q6ZN66 633 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 ZNF366Q8N895 744 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 LMLNQ96KR4 655 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 MED15Q96RN5 788 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 NUCKS1Q9H1E3 243 aaKnown RBP23.62■■□□□ 1.37
PTPN4-207ENST00000460162 STIM2Q9P246 746 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 CYTH4Q9UIA0 394 aa23.62■■□□□ 1.37
PTPN4-207ENST00000460162 BECN2A8MW95 431 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 GJB3O75712 270 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 MOCS2O96007 188 aaPredicted RBP23.61■■□□□ 1.37
PTPN4-207ENST00000460162 IGLV3-25P01717 112 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 ASLP04424 464 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 RPS24P62847 133 aaKnown RBP23.61■■□□□ 1.37
PTPN4-207ENST00000460162 HNRNPDQ14103 355 aaKnown RBP23.61■■□□□ 1.37
PTPN4-207ENST00000460162 EXOC3L4Q17RC7 722 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 TTC31Q49AM3 519 aaPredicted RBP23.61■■□□□ 1.37
PTPN4-207ENST00000460162 SYPL2Q5VXT5 272 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 CCDC117Q8IWD4 279 aaPredicted RBP23.61■■□□□ 1.37
PTPN4-207ENST00000460162 OR2I1PQ8NGU4 316 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 ADAM32Q8TC27 787 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 SHC3Q92529 594 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 TTC17Q96AE7 1141 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 THAP9Q9H5L6 903 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 ACP6Q9NPH0 428 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 PRSS16Q9NQE7 514 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 SUN2Q9UH99 717 aa23.61■■□□□ 1.37
PTPN4-207ENST00000460162 DNTTP04053 509 aa23.6■■□□□ 1.37
PTPN4-207ENST00000460162 CD59P13987 128 aa23.6■■□□□ 1.37
PTPN4-207ENST00000460162 SLC9A1P19634 815 aa23.6■■□□□ 1.37
PTPN4-207ENST00000460162 ST8SIA6P61647 398 aa23.6■■□□□ 1.37
PTPN4-207ENST00000460162 YWHAZP63104 245 aaKnown RBP23.6■■□□□ 1.37
PTPN4-207ENST00000460162 GJB7Q6PEY0 223 aa23.6■■□□□ 1.37
PTPN4-207ENST00000460162 FAM124AQ86V42 546 aa23.6■■□□□ 1.37
PTPN4-207ENST00000460162 MLKLQ8NB16 471 aa23.6■■□□□ 1.37
PTPN4-207ENST00000460162 MYEOVQ96EZ4 313 aa23.6■■□□□ 1.37
PTPN4-207ENST00000460162 MIR1-1HGQ9H1L0 117 aa23.6■■□□□ 1.37
PTPN4-207ENST00000460162 NUMA1Q14980 2115 aa23.6■■□□□ 1.37
PTPN4-207ENST00000460162 BCAT2O15382 392 aaPredicted RBP23.59■■□□□ 1.37
PTPN4-207ENST00000460162 LUC7L3O95232 432 aaKnown RBP23.59■■□□□ 1.37
PTPN4-207ENST00000460162 TRUB2O95900 331 aaKnown RBP23.59■■□□□ 1.37
PTPN4-207ENST00000460162 RPS14P62263 151 aaKnown RBP23.59■■□□□ 1.37
PTPN4-207ENST00000460162 SIM1P81133 766 aaPredicted RBP23.59■■□□□ 1.37
PTPN4-207ENST00000460162 ARHGAP44Q17R89 818 aa23.59■■□□□ 1.37
PTPN4-207ENST00000460162 ZNF776Q68DI1 518 aaPredicted RBP23.59■■□□□ 1.37
PTPN4-207ENST00000460162 CREBRFQ8IUR6 639 aa23.59■■□□□ 1.37
PTPN4-207ENST00000460162 CARNMT1Q8N4J0 409 aa23.59■■□□□ 1.37
PTPN4-207ENST00000460162 KDM1BQ8NB78 822 aa23.59■■□□□ 1.37
PTPN4-207ENST00000460162 MYO19Q96H55 970 aa23.59■■□□□ 1.37
PTPN4-207ENST00000460162 BTN2A3PQ96KV6 586 aa23.59■■□□□ 1.37
PTPN4-207ENST00000460162 ADAM33Q9BZ11 813 aa23.59■■□□□ 1.37
PTPN4-207ENST00000460162 TJP2Q9UDY2 1190 aa23.59■■□□□ 1.37
PTPN4-207ENST00000460162 SPAARA0A1B0GVQ0 90 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 KRT37O76014 449 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 GLI1P08151 1106 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 ACSL1P33121 698 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 USP8P40818 1118 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 CSKP41240 450 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 DCAF6Q58WW2 860 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 UNQ6494/PRO21346Q6UXR6 183 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 CHSY1Q86X52 802 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 IRF2BP1Q8IU81 584 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 BTBD1Q9H0C5 482 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 ASNSD1Q9NWL6 643 aa23.58■■□□□ 1.37
PTPN4-207ENST00000460162 EIF2B4Q9UI10 523 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms