RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 METTL3Q86U44 580 aaKnown RBP17.09■□□□□ 0.33
SHANK2-213ENST00000460048 ATP6V0D2Q8N8Y2 350 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 EPS8L1Q8TE68 723 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 RTKNQ9BST9 563 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 RXFP3Q9NSD7 469 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 STIM2Q9P246 746 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 DAAM1Q9Y4D1 1078 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 GON4LQ3T8J9 2241 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 LGALS16A8MUM7 142 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 SLC30A4O14863 429 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 MAP3K13O43283 966 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 LSM8O95777 96 aaKnown RBP17.08■□□□□ 0.32
SHANK2-213ENST00000460048 MMEP08473 750 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 TACR2P21452 398 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 NOS2P35228 1153 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 SCNN1AP37088 669 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 DHPSP49366 369 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-213ENST00000460048 POLR2FP61218 127 aaKnown RBP17.08■□□□□ 0.32
SHANK2-213ENST00000460048 PTPRNQ16849 979 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 TAF3Q5VWG9 929 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 RAP1GAP2Q684P5 730 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 MBLAC2Q68D91 279 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 SLC36A4Q6YBV0 504 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 DGLUCYQ7Z3D6 616 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 CYP2U1Q7Z449 544 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 MFN1Q8IWA4 741 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 TMEFF1Q8IYR6 380 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 C12orf50Q8NA57 414 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-213ENST00000460048 ANKRD20A12PQ8NF67 263 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 CYB5D2Q8WUJ1 264 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 PRMT1Q99873 361 aaKnown RBP17.08■□□□□ 0.32
SHANK2-213ENST00000460048 MKRN2Q9H000 416 aaKnown RBP17.08■□□□□ 0.32
SHANK2-213ENST00000460048 PDCL3Q9H2J4 239 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 TMEM245Q9H330 911 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 SYNCQ9H7C4 482 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 FAM204AQ9H8W3 233 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 CD93Q9NPY3 652 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 FAM207AQ9NSI2 230 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-213ENST00000460048 DDIT4Q9NX09 232 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 NOCTQ9UK39 431 aaKnown RBP17.08■□□□□ 0.32
SHANK2-213ENST00000460048 DOCK4Q8N1I0 1966 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 ADAMTS9Q9P2N4 1935 aa17.08■□□□□ 0.32
SHANK2-213ENST00000460048 LAMA1P25391 3075 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 TYW5A2RUC4 315 aaKnown RBP17.07■□□□□ 0.32
SHANK2-213ENST00000460048 GFPT2O94808 682 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 C7P10643 843 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 SLC2A3P11169 496 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 CCR1P32246 355 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 SOX5P35711 763 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 MATKP42679 507 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 PTGER3P43115 390 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 COPAP53621 1224 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 LIMK1P53667 647 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 NOMO3P69849 1222 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 FOXK2Q01167 660 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 ARID5AQ03989 594 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 LMAN2Q12907 356 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 SYCP1Q15431 976 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 AASDHQ4L235 1098 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-213ENST00000460048 OTUD1Q5VV17 481 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-213ENST00000460048 TCEAL6Q6IPX3 200 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 SERPINA13PQ6UXR4 307 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 CHSY1Q86X52 802 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 ZNF677Q86XU0 584 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 XYLT1Q86Y38 959 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 LGI2Q8N0V4 545 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 CFAP52Q8N1V2 620 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 TCEAL3Q969E4 200 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 TTC17Q96AE7 1141 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 C18orf8Q96DM3 657 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 ERGIC2Q96RQ1 377 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 NPY6RQ99463 290 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 PRDM16Q9HAZ2 1276 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 NLRC4Q9NPP4 1024 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 USP36Q9P275 1121 aaKnown RBP17.07■□□□□ 0.32
SHANK2-213ENST00000460048 SLC12A6Q9UHW9 1150 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 INTS6Q9UL03 887 aaKnown RBP17.07■□□□□ 0.32
SHANK2-213ENST00000460048 CYP8B1Q9UNU6 501 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 CACNA1AO00555 2505 aa17.07■□□□□ 0.32
SHANK2-213ENST00000460048 AP5Z1O43299 807 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 SYNCRIPO60506 623 aaKnown RBP17.06■□□□□ 0.32
SHANK2-213ENST00000460048 LUC7L3O95232 432 aaKnown RBP17.06■□□□□ 0.32
SHANK2-213ENST00000460048 EPHX1P07099 455 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 DLDP09622 509 aaKnown RBP17.06■□□□□ 0.32
SHANK2-213ENST00000460048 HLA-EP13747 358 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 POLR2EP19388 210 aaKnown RBP17.06■□□□□ 0.32
SHANK2-213ENST00000460048 ABCB4P21439 1286 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 CAMK2GQ13555 558 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-213ENST00000460048 FSCBQ5H9T9 825 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 KIAA1324Q6UXG2 1013 aaKnown RBP17.06■□□□□ 0.32
SHANK2-213ENST00000460048 ERICH1Q86X53 443 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 CARNMT1Q8N4J0 409 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 AOPEPQ8N6M6 819 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 SLC20A1Q8WUM9 679 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 NT5C3BQ969T7 300 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 MYO19Q96H55 970 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 BPIFA3Q9BQP9 254 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 ADAM33Q9BZ11 813 aa17.06■□□□□ 0.32
SHANK2-213ENST00000460048 ITM2CQ9NQX7 267 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms