RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 TERB1Q8NA31 727 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 RFFLQ8WZ73 363 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 NTAN1Q96AB6 310 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 DDX50Q9BQ39 737 aaKnown RBP13.27□□□□□ -0.29
COL18A1-206ENST00000459895 WDCPQ9H6R7 721 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 OSGEPQ9NPF4 335 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 ARHGEF4Q9NR80 690 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 DLGAP2Q9P1A6 1054 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 CTTNBP2NLQ9P2B4 639 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 VANGL2Q9ULK5 521 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 MRPS17Q9Y2R5 130 aaKnown RBP13.27□□□□□ -0.29
COL18A1-206ENST00000459895 REXO2Q9Y3B8 237 aaKnown RBP13.27□□□□□ -0.29
COL18A1-206ENST00000459895 TYW5A2RUC4 315 aaKnown RBP13.26□□□□□ -0.29
COL18A1-206ENST00000459895 FAM170BA6NMN3 283 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.26□□□□□ -0.29
COL18A1-206ENST00000459895 EIF3CLB5ME19 914 aaKnown RBP13.26□□□□□ -0.29
COL18A1-206ENST00000459895 KAT7O95251 611 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 CHRNB1P11230 501 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 DGKGP49619 791 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 MRE11P49959 708 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 GALK1P51570 392 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 GSDMDP57764 484 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 AMPD2Q01433 879 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 SCAPQ12770 1279 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 FZD5Q13467 585 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 AUHQ13825 339 aaKnown RBP13.26□□□□□ -0.29
COL18A1-206ENST00000459895 LRRC32Q14392 662 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 MANEALQ5VSG8 457 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 FBXL22Q6P050 247 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 PKN3Q6P5Z2 889 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 TMTC1Q8IUR5 882 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 MFN1Q8IWA4 741 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 IGSF8Q969P0 613 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 RPRD1AQ96P16 312 aaPredicted RBP13.26□□□□□ -0.29
COL18A1-206ENST00000459895 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
COL18A1-206ENST00000459895 EIF3CQ99613 913 aaKnown RBP13.26□□□□□ -0.29
COL18A1-206ENST00000459895 DESI2Q9BSY9 194 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 LRFN3Q9BTN0 628 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 SIK2Q9H0K1 926 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 GPATCH2LQ9NWQ4 482 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 STIM2Q9P246 746 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 SIT1Q9Y3P8 196 aa13.26□□□□□ -0.29
COL18A1-206ENST00000459895 A0A1B0GVM2 712 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 TCAF2A6NFQ2 919 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 E9PAM4 449 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 FAM72CH0Y354 149 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 RNF40O75150 1001 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 LUC7L3O95232 432 aaKnown RBP13.25□□□□□ -0.29
COL18A1-206ENST00000459895 DESP17661 470 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 CLCN5P51795 746 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 SEC13P55735 322 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 SLC25A11Q02978 314 aaKnown RBP13.25□□□□□ -0.29
COL18A1-206ENST00000459895 GRSF1Q12849 480 aaKnown RBP eCLIP13.25□□□□□ -0.297e-13■□□□□ 8.5
COL18A1-206ENST00000459895 GEN1Q17RS7 908 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 RABGAP1LQ5R372 815 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 C10orf76Q5T2E6 689 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 FAM72AQ5TYM5 149 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 TTC39BQ5VTQ0 682 aaPredicted RBP13.25□□□□□ -0.29
COL18A1-206ENST00000459895 FAM72DQ6L9T8 149 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 SCYL2Q6P3W7 929 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 ANKS1BQ7Z6G8 1248 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 FAM72BQ86X60 149 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 PYROXD2Q8N2H3 581 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 NIPA2Q8N8Q9 360 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 PNKPQ96T60 521 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 SNRNP25Q9BV90 132 aaKnown RBP13.25□□□□□ -0.29
COL18A1-206ENST00000459895 MAGEB5Q9BZ81 275 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 OSBPL6Q9BZF3 934 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 CHRDQ9H2X0 955 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 ZDHHC4Q9NPG8 344 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 DEC1Q9P2X7 70 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 UVRAGQ9P2Y5 699 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 SLC12A6Q9UHW9 1150 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 CHD5Q8TDI0 1954 aa13.25□□□□□ -0.29
COL18A1-206ENST00000459895 F5P12259 2224 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 RCCD1A6NED2 376 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 TMEM110-MUSTN1A8MSY1 372 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 PRRT4C9JH25 899 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 K7EQS6 105 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 CNTN5O94779 1100 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 APODP05090 189 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 CISD3P0C7P0 127 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 DRD1P21728 446 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 MIPP30301 263 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 HLA-FP30511 346 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 CD70P32970 193 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 ADRA1BP35368 520 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 RPS9P46781 194 aaKnown RBP13.24□□□□□ -0.29
COL18A1-206ENST00000459895 MTA1Q13330 715 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 CDH18Q13634 790 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 GAS6Q14393 721 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 SPA17Q15506 151 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 CA9Q16790 459 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 SMTNL2Q2TAL5 461 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 ARL13BQ3SXY8 428 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 FUT11Q495W5 492 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 ALFQ53S48 1182 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 EFHC2Q5JST6 749 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 MPP7Q5T2T1 576 aa13.24□□□□□ -0.29
COL18A1-206ENST00000459895 CXorf57Q6NSI4 855 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms