RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ALOX15P16050 662 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-202ENST00000459727 CALRP27797 417 aaKnown RBP9.09□□□□□ -0.95
HDAC3-202ENST00000459727 ADORA2BP29275 332 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 ADCYAP1R1P41586 468 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 LHX1P48742 406 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 NPY2RP49146 381 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 CPT1AP50416 773 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 KPNA2P52292 529 aaKnown RBP9.09□□□□□ -0.95
HDAC3-202ENST00000459727 CRYBB1P53674 252 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-202ENST00000459727 PDE1BQ01064 536 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 DEUP1Q05D60 604 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 KLC1Q07866 573 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 LBRQ14739 615 aaKnown RBP9.09□□□□□ -0.95
HDAC3-202ENST00000459727 CA9Q16790 459 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 UGP2Q16851 508 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 FAM110CQ1W6H9 321 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 KIZQ2M2Z5 673 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 METTL21CQ5VZV1 264 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 IRGCQ6NXR0 463 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 RFX8Q6ZV50 586 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 LINC00523Q86TU6 105 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 RASSF3Q86WH2 238 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
HDAC3-202ENST00000459727 IRGQQ8WZA9 623 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 FAM149B1Q96BN6 582 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 CMTM5Q96DZ9 223 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 CERS2Q96G23 380 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 PIWIL1Q96J94 861 aaKnown RBP9.09□□□□□ -0.95
HDAC3-202ENST00000459727 RILPQ96NA2 401 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 ZNF570Q96NI8 536 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 EPAS1Q99814 870 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 TINF2Q9BSI4 451 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 NMUR2Q9GZQ4 415 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 CNGB3Q9NQW8 809 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 ARL8BQ9NVJ2 186 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 MTMR10Q9NXD2 777 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 RNF181Q9P0P0 153 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 BCAP29Q9UHQ4 241 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 SOX13Q9UN79 622 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 ANKRD6Q9Y2G4 727 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 Q9Y3F1 56 aa9.09□□□□□ -0.95
HDAC3-202ENST00000459727 SMIM28A0A1B0GU29 152 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 FAM237BA0A1B0GVD1 139 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 CXorf49A8MYA2 514 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 SLCO1B7G3V0H7 640 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PDHXO00330 501 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 CAPN9O14815 690 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 MFSD11O43934 449 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PLIN3O60664 434 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PEX10O60683 326 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 KPNA6O60684 536 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 AP2A1O95782 977 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 ITGA2BP08514 1039 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 SMIM10L2AP0DMW4 78 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 SMIM10L2BP0DMW5 78 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 GOT1P17174 413 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 SMPD1P17405 629 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 ACAT1P24752 427 aaKnown RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PCSK1P29120 753 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 ADSLP30566 484 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PTDSS1P48651 473 aaKnown RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 AQP5P55064 265 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 SH3BGRP55822 239 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 TPI1P60174 286 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 RPL26P61254 145 aaKnown RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 MXRA7P84157 204 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 XIAPP98170 497 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 ADIGQ0VDE8 80 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 AP1B1Q10567 949 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 DPYSQ14117 519 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 KPNB1Q14974 876 aaKnown RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 RCN1Q15293 331 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 FASTKD1Q53R41 847 aaKnown RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 DCAF6Q58WW2 860 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 FAXCQ5TGI0 409 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 MROH9Q5TGP6 573 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 MBLAC2Q68D91 279 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 NAPEPLDQ6IQ20 393 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 TAF2Q6P1X5 1199 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 LRRC74BQ6ZQY2 392 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 DENND5BQ6ZUT9 1274 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 BEND5Q7L4P6 421 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PLEKHH3Q7Z736 793 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 ADGRG6Q86SQ4 1221 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 SETD3Q86TU7 594 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PIGZQ86VD9 579 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 CCDC117Q8IWD4 279 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 SCUBE1Q8IWY4 988 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 DEFB106AQ8N104 65 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 SCML4Q8N228 414 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 DNAJC5GQ8N7S2 189 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 SLC2A14Q8TDB8 520 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PTCD2Q8WV60 388 aaKnown RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 KBTBD7Q8WVZ9 684 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 HDAC11Q96DB2 347 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 PGBD4Q96DM1 585 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 P2RY11Q96G91 374 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 MAML3Q96JK9 1138 aa9.08□□□□□ -0.96
HDAC3-202ENST00000459727 ZMAT2Q96NC0 199 aaKnown RBP9.08□□□□□ -0.96
HDAC3-202ENST00000459727 MIPEPQ99797 713 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms