RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 ARID5BQ14865 1188 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 PKDCCQ504Y2 493 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 SGO2Q562F6 1265 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 MBLAC2Q68D91 279 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 ZNF776Q68DI1 518 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-227ENST00000458564 SCUBE3Q8IX30 993 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 SIX6OS1Q8N1H7 587 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 ZNF366Q8N895 744 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 WFDC5Q8TCV5 224 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 NDRG1Q92597 394 aaKnown RBP10.86□□□□□ -0.67
HDLBP-227ENST00000458564 TATDN2Q93075 761 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 MYO19Q96H55 970 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 LMLNQ96KR4 655 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 RSPH9Q9H1X1 276 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-227ENST00000458564 HESX1Q9UBX0 185 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 SFMBT1Q9UHJ3 866 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.86□□□□□ -0.67
HDLBP-227ENST00000458564 KNTC1P50748 2209 aa10.86□□□□□ -0.67
HDLBP-227ENST00000458564 COL5A1P20908 1838 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-227ENST00000458564 TRABD2BA6NFA1 517 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 H0Y8X5 98 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 VILLO15195 856 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 MSI1O43347 362 aaKnown RBP10.85□□□□□ -0.67
HDLBP-227ENST00000458564 EPB41P11171 864 aaKnown RBP10.85□□□□□ -0.67
HDLBP-227ENST00000458564 SGSHP51688 502 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 DAOAP59103 153 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 YWHAEP62258 255 aaKnown RBP10.85□□□□□ -0.67
HDLBP-227ENST00000458564 CUL2Q13617 745 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 HNRNPA1L2Q32P51 320 aaKnown RBP10.85□□□□□ -0.67
HDLBP-227ENST00000458564 CBWD6Q4V339 395 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 FAM133BQ5BKY9 247 aaKnown RBP10.85□□□□□ -0.67
HDLBP-227ENST00000458564 CBWD3Q5JTY5 395 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 KCNT1Q5JUK3 1230 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 CBWD5Q5RIA9 395 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 PIK3R6Q5UE93 754 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 NUGGCQ68CJ6 796 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 KIAA0895LQ68EN5 471 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 LAYNQ6UX15 382 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 HSCBQ8IWL3 235 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 UBR7Q8N806 425 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 PDCD7Q8N8D1 485 aaKnown RBP10.85□□□□□ -0.67
HDLBP-227ENST00000458564 KDM1BQ8NB78 822 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 HNRNPLLQ8WVV9 542 aaKnown RBP10.85□□□□□ -0.67
HDLBP-227ENST00000458564 IRGQQ8WZA9 623 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 EDEM1Q92611 657 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 AZIN2Q96A70 460 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 TTC17Q96AE7 1141 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 PABPC3Q9H361 631 aaKnown RBP10.85□□□□□ -0.67
HDLBP-227ENST00000458564 SUN2Q9UH99 717 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 KIAA1257Q9ULG3 409 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 PCDHGA1Q9Y5H4 931 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 ASXL3Q9C0F0 2248 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 KALRNO60229 2985 aa10.85□□□□□ -0.67
HDLBP-227ENST00000458564 HELZ2Q9BYK8 2649 aaKnown RBP10.85□□□□□ -0.67
HDLBP-227ENST00000458564 BPTFQ12830 3046 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 A0A1B0GTQ1 180 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 A0A1W2PPC4 97 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 CETN3O15182 167 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 SLC16A3O15427 465 aaKnown RBP10.84□□□□□ -0.67
HDLBP-227ENST00000458564 FSBPO95073 299 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 ASLP04424 464 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 HSP90AA1P07900 732 aaKnown RBP10.84□□□□□ -0.67
HDLBP-227ENST00000458564 VDRP11473 427 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 POLR2EP19388 210 aaKnown RBP10.84□□□□□ -0.67
HDLBP-227ENST00000458564 TBXAS1P24557 533 aaPredicted RBP10.84□□□□□ -0.67
HDLBP-227ENST00000458564 CD70P32970 193 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 SLC11A2P49281 568 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 KRT85P78386 507 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 CYP4F3Q08477 520 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 SFSWAPQ12872 951 aaKnown RBP10.84□□□□□ -0.67
HDLBP-227ENST00000458564 NNTQ13423 1086 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 LCLAT1Q6UWP7 414 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 KRBA2Q6ZNG9 492 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 ADAT2Q7Z6V5 191 aaKnown RBP10.84□□□□□ -0.67
HDLBP-227ENST00000458564 TMPRSS12Q86WS5 348 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 MFN1Q8IWA4 741 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 UNC45BQ8IWX7 931 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 HJURPQ8NCD3 748 aaPredicted RBP10.84□□□□□ -0.67
HDLBP-227ENST00000458564 FIBINQ8TAL6 211 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 SLC35F5Q8WV83 523 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 EEF2KMTQ96G04 330 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 SPATA32Q96LK8 384 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 BBC3Q96PG8 261 aaPredicted RBP10.84□□□□□ -0.67
HDLBP-227ENST00000458564 ACE2Q9BYF1 805 aaPredicted RBP10.84□□□□□ -0.67
HDLBP-227ENST00000458564 FTSJ1Q9UET6 329 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 ADAMTS1Q9UHI8 967 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 FZD4Q9ULV1 537 aa10.84□□□□□ -0.67
HDLBP-227ENST00000458564 TPX2Q9ULW0 747 aaKnown RBP10.84□□□□□ -0.67
HDLBP-227ENST00000458564 TMEM131Q92545 1883 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 A0A1W2PQ27 194 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 A0A1W2PQ64 194 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 FAM149AA5PLN7 773 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 GOLGA8CPA6NN73 597 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 YKT6O15498 198 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 ACSL4O60488 711 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 TBL1XO60907 577 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 GABBR2O75899 941 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 PAEPP09466 180 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 CDK4P11802 303 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 CD19P15391 556 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms