RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ZNF397Q8NF99 534 aaPredicted RBP19.35■□□□□ 0.69
USP39-209ENST00000458268 AZIN2Q96A70 460 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 AGPAT1Q99943 283 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 SLC6A17Q9H1V8 727 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 PIGVQ9NUD9 493 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 STARD13Q9Y3M8 1113 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 STON1Q9Y6Q2 735 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 RIF1Q5UIP0 2472 aaKnown RBP19.35■□□□□ 0.69
USP39-209ENST00000458268 THADAQ6YHU6 1953 aa19.35■□□□□ 0.69
USP39-209ENST00000458268 PTPRZ1P23471 2315 aaPredicted RBP19.34■□□□□ 0.69
USP39-209ENST00000458268 CCDC163A0A0D9SF12 145 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 TMCO5BA8MYB1 307 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 MAP3K13O43283 966 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 CCDC172P0C7W6 258 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 HLA-EP13747 358 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 IL12RB1P42701 662 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 ATXN1P54253 815 aaKnown RBP19.34■□□□□ 0.69
USP39-209ENST00000458268 UBASH3AP57075 661 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 ATP11AP98196 1134 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 SPEM2Q0P670 501 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 ZNF234Q14588 700 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 STARD3Q14849 445 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 CCDC6Q16204 474 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 CLEC16AQ2KHT3 1053 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 TMEM215Q68D42 235 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 MBLAC2Q68D91 279 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 KIAA1211LQ6NV74 962 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 SERPINA13PQ6UXR4 307 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 WFIKKN2Q8TEU8 576 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 CFAP57Q96MR6 1250 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 RPRD1AQ96P16 312 aaPredicted RBP19.34■□□□□ 0.69
USP39-209ENST00000458268 ADAM22Q9P0K1 906 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 CALCOCO1Q9P1Z2 691 aa19.34■□□□□ 0.69
USP39-209ENST00000458268 SYNCRIPO60506 623 aaKnown RBP19.33■□□□□ 0.68
USP39-209ENST00000458268 PAGE1O75459 146 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 EPHX1P07099 455 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 GABRG2P18507 467 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 POLR2EP19388 210 aaKnown RBP19.33■□□□□ 0.68
USP39-209ENST00000458268 TNFAIP3P21580 790 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 CENPCQ03188 943 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 LMAN2Q12907 356 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 SFMBT2Q5VUG0 894 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 OTUD1Q5VV17 481 aaPredicted RBP19.33■□□□□ 0.68
USP39-209ENST00000458268 ARMCX6Q7L4S7 300 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 AHI1Q8N157 1196 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 KCNV2Q8TDN2 545 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 SPACA7Q96KW9 195 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 NPY6RQ99463 290 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 SELENOOQ9BVL4 669 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 ADAM33Q9BZ11 813 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 TKTL2Q9H0I9 626 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 TSPY26PQ9H489 355 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 WDCPQ9H6R7 721 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 IFNKQ9P0W0 207 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 EBF1Q9UH73 591 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 VANGL2Q9ULK5 521 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 SNX10Q9Y5X0 201 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 GPR179Q6PRD1 2367 aa19.33■□□□□ 0.68
USP39-209ENST00000458268 EP300Q09472 2414 aaPredicted RBP19.32■□□□□ 0.68
USP39-209ENST00000458268 A0A1W2PQC6 194 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 GFRA2O00451 464 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 LUC7L3O95232 432 aaKnown RBP19.32■□□□□ 0.68
USP39-209ENST00000458268 ADCY5O95622 1261 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 BCKDHBP21953 392 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 MMP8P22894 467 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 EIF4HQ15056 248 aaKnown RBP19.32■□□□□ 0.68
USP39-209ENST00000458268 ELF2Q15723 593 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 FUT11Q495W5 492 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 RABGAP1LQ5R372 815 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 RASSF3Q86WH2 238 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 FRMD1Q8N878 549 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 RNF214Q8ND24 703 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 JOSD2Q8TAC2 188 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 CPLX3Q8WVH0 158 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 BAP1Q92560 729 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 ARRDC1-AS1Q9H2J1 176 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 TMPRSS4Q9NRS4 437 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 RRN3Q9NYV6 651 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 THAP10Q9P2Z0 257 aaPredicted RBP19.32■□□□□ 0.68
USP39-209ENST00000458268 CYP8B1Q9UNU6 501 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 PLA2G4CQ9UP65 541 aa19.32■□□□□ 0.68
USP39-209ENST00000458268 ABCA7Q8IZY2 2146 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 DMDP11532 3685 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 A0A1W2PQF6 199 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 CAVIN2O95810 425 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 CALB1P05937 261 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 UNGP13051 313 aaPredicted RBP19.31■□□□□ 0.68
USP39-209ENST00000458268 NDUFV2P19404 249 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 PRKCHP24723 683 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 SCNN1AP37088 669 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 DHPSP49366 369 aaPredicted RBP19.31■□□□□ 0.68
USP39-209ENST00000458268 NR1I3Q14994 352 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 NFKBIBQ15653 356 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 C15orf59Q2T9L4 293 aaPredicted RBP19.31■□□□□ 0.68
USP39-209ENST00000458268 SLC25A52Q3SY17 297 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 FSCBQ5H9T9 825 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 TRNP1Q6NT89 227 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 FAM131BQ86XD5 332 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 DEFB119Q8N690 84 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 RXFP2Q8WXD0 754 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms