RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ARL14EPQ8N8R7 260 aaPredicted RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 TSEN2Q8NCE0 465 aaKnown RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 ST13P5Q8NFI4 369 aaPredicted RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 OR52K2Q8NGK3 314 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 AENQ8WTP8 325 aaKnown RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 SLCO2A1Q92959 643 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 NKD2Q969F2 451 aaPredicted RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 TRMT2BQ96GJ1 504 aaKnown RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 CELF6Q96J87 481 aaKnown RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 ZNF512Q96ME7 567 aaPredicted RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 PRICKLE1Q96MT3 831 aaPredicted RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 OLFM3Q96PB7 478 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 TGS1Q96RS0 853 aaKnown RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 PLVAPQ9BX97 442 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 KLF16Q9BXK1 252 aaPredicted RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 SIK2Q9H0K1 926 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 USP29Q9HBJ7 922 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 MAN1C1Q9NR34 630 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 TLR8Q9NR97 1041 aaKnown RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.03□□□□□ -0.96
RIF1-208ENST00000457745 ZDHHC18Q9NUE0 388 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.03□□□□□ -0.96
RIF1-208ENST00000457745 COMMD8Q9NX08 183 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 CLIC5Q9NZA1 410 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 DTLQ9NZJ0 730 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 MPP6Q9NZW5 540 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 STIM2Q9P246 746 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 DNMT3BQ9UBC3 853 aaKnown RBP9.03□□□□□ -0.96
RIF1-208ENST00000457745 HSFX1Q9UBD0 423 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 NFU1Q9UMS0 254 aa9.03□□□□□ -0.96
RIF1-208ENST00000457745 COL4A3Q01955 1670 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 TCRBV7S3A2A0A539 114 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 TARSL2A2RTX5 802 aaKnown RBP9.02□□□□□ -0.97
RIF1-208ENST00000457745 F5H423 210 aaPredicted RBP9.02□□□□□ -0.97
RIF1-208ENST00000457745 APOC4-APOC2K7ER74 178 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 EEF2KO00418 725 aaKnown RBP9.02□□□□□ -0.97
RIF1-208ENST00000457745 STC2O76061 302 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 OLFM2O95897 454 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 GLUD1P00367 558 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 APOC2P02655 101 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 ADH1AP07327 375 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 CSH1P0DML2 217 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 CSH2P0DML3 217 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 IRF1P10914 325 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 GABRR2P28476 465 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 RBL1P28749 1068 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 HOXC13P31276 330 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 RPL22P35268 128 aaKnown RBP9.02□□□□□ -0.97
RIF1-208ENST00000457745 CHKAP35790 457 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 EIF3EP60228 445 aaKnown RBP9.02□□□□□ -0.97
RIF1-208ENST00000457745 PTK6Q13882 451 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 KCNC3Q14003 757 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 PPP2R5DQ14738 602 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 EFHC2Q5JST6 749 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 BEND6Q5SZJ8 279 aaPredicted RBP9.02□□□□□ -0.97
RIF1-208ENST00000457745 ANKRD22Q5VYY1 191 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 RFWD3Q6PCD5 774 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 RHBDF2Q6PJF5 856 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 NLRP14Q86W24 1093 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 ALLCQ8N6M5 410 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 LGMNQ99538 433 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 GORASP1Q9BQQ3 440 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 CORO1BQ9BR76 489 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 WDR83Q9BRX9 315 aaKnown RBP9.02□□□□□ -0.97
RIF1-208ENST00000457745 CEP41Q9BYV8 373 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 MTIF3Q9H2K0 278 aaKnown RBP9.02□□□□□ -0.97
RIF1-208ENST00000457745 ADAM7Q9H2U9 754 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 WDCPQ9H6R7 721 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 RRN3Q9NYV6 651 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 OR12D3Q9UGF7 316 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 RABGEF1Q9UJ41 708 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 TLR6Q9Y2C9 796 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 EFR3BQ9Y2G0 817 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 HEY1Q9Y5J3 304 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 CHD5Q8TDI0 1954 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 PDE4DIPQ5VU43 2346 aa9.02□□□□□ -0.97
RIF1-208ENST00000457745 MYOFQ9NZM1 2061 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 LAMA2P24043 3122 aaKnown RBP9.01□□□□□ -0.97
RIF1-208ENST00000457745 GOLGA6L10A0A0M3HER8 536 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 A0A1W2PRU2 124 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 FAM187AA6NFU0 413 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 GOLGA8CPA6NN73 597 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 ZNF487B1APH4 448 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 E9PAM4 449 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 H3BRJ5 948 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 BANF1O75531 89 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 TJP3O95049 919 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 PRAMEF12O95522 483 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 ECEL1O95672 775 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 F9P00740 461 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 KRT14P02533 472 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 RB1P06400 928 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 SRGAP2BP0DMP2 458 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 RBP3P10745 1247 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 MYL4P12829 197 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 TNFRSF8P28908 595 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 ELF1P32519 619 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 ALDH1A3P47895 512 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 EPHB3P54753 998 aa9.01□□□□□ -0.97
RIF1-208ENST00000457745 TPI1P60174 286 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms