RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 DPEP3Q9H4B8 488 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ETNK1Q9HBU6 452 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 POLD4Q9HCU8 107 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 GPRC5CQ9NQ84 441 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 POLE3Q9NRF9 147 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 IL37Q9NZH6 218 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 TRPM5Q9NZQ8 1165 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ARHGAP28Q9P2N2 729 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 SEPT9Q9UHD8 586 aaPredicted RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 CDH7Q9ULB5 785 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 AP3M1Q9Y2T2 418 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 TDRKHQ9Y2W6 561 aaKnown RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 RWDD3Q9Y3V2 267 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 PCDHGA10Q9Y5H3 936 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 CSNK1G3Q9Y6M4 447 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 SCN10AQ9Y5Y9 1956 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 TLDC2A0PJX2 215 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ILVBLA1L0T0 632 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 BHMG1C9JSJ3 638 aaPredicted RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 K7ENM7 598 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 RNF103O00237 685 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 GAS2O43903 313 aaKnown RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 SORBS3O60504 671 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 CSDE1O75534 798 aaKnown RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 SULT1C4O75897 302 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ALDH1A1P00352 501 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 NR3C1P04150 777 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 GYPCP04921 128 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ITGAXP20702 1163 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 NR2F2P24468 414 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 MARK3P27448 753 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 GSTM2P28161 218 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 CTGFP29279 349 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 HOXA6P31267 233 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ARL2P36404 184 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 MMP13P45452 471 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 NPTX2P47972 431 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 VPS41P49754 854 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 STX1BP61266 288 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 DSG1Q02413 1049 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 PRKCQQ04759 706 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ZNF33BQ06732 778 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ASPHQ12797 758 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 NOGQ13253 232 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 EMC2Q15006 297 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 CCDC6Q16204 474 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 C5orf22Q49AR2 442 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ZC2HC1CQ53FD0 456 aaPredicted RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 FIGNQ5HY92 759 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ZC3H12BQ5HYM0 836 aaKnown RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 C6orf118Q5T5N4 469 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 KLHDC10Q6PID8 442 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 LINC00299Q6ZSB3 139 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 IKBIPQ70UQ0 350 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 HS2ST1Q7LGA3 356 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 HAUS6Q7Z4H7 955 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 FRMD5Q7Z6J6 570 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 MAP4K3Q8IVH8 894 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 CLYBLQ8N0X4 340 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 GRPEL2Q8TAA5 225 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 UTP4Q969X6 686 aaKnown RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 PGM2Q96G03 612 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 SLC39A13Q96H72 371 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 TBATAQ96M53 351 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 SPATA33Q96N06 139 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 APBA2Q99767 749 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 SH2D3AQ9BRG2 576 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 DDX23Q9BUQ8 820 aaKnown RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 MRPS26Q9BYN8 205 aaKnown RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 MTMR12Q9C0I1 747 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 TMEM206Q9H813 350 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 LZTFL1Q9NQ48 299 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 SAR1AQ9NR31 198 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 AGPAT3Q9NRZ7 376 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 NRBP2Q9NSY0 501 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 PAQR5Q9NXK6 330 aaPredicted RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 IGSF9Q9P2J2 1179 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 STRIP2Q9ULQ0 834 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ABT1Q9ULW3 272 aaKnown RBP7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 PRKAB1Q9Y478 270 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 CACNG2Q9Y698 323 aa7.03□□□□□ -1.28
CUBNP3-201ENST00000457461 ADGRA3Q8IWK6 1321 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 SYNJ2BP-COX16A0A087WUM0 186 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 NOP56O00567 594 aaKnown RBP7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 KPNA4O00629 521 aaPredicted RBP7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 MAPK13O15264 365 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 ADCY6O43306 1168 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 ATP2C2O75185 946 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 AKAP3O75969 853 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 POP4O95707 220 aaKnown RBP7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 ASS1P00966 412 aaKnown RBP7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 CAPNS1P04632 268 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 FAM228BP0C875 321 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 ZNF865P0CJ78 1059 aaPredicted RBP7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 C7P10643 843 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 NCAM1P13591 858 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 PRKCAP17252 672 aa7.02□□□□□ -1.29
CUBNP3-201ENST00000457461 SMPD1P17405 629 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms