RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 LGI2Q8N0V4 545 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 CCDC185Q8N715 623 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 NIPA2Q8N8Q9 360 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 HJURPQ8NCD3 748 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-215ENST00000457039 ZNF564Q8TBZ8 553 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-215ENST00000457039 BHMTQ93088 406 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 CLDN23Q96B33 292 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 XPO6Q96QU8 1125 aaKnown RBP14.62□□□□□ -0.07
SMPD4-215ENST00000457039 PNKPQ96T60 521 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 DLGAP2Q9P1A6 1054 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 DEC1Q9P2X7 70 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 ANAPC7Q9UJX3 599 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 NDRG2Q9UN36 371 aaKnown RBP14.62□□□□□ -0.07
SMPD4-215ENST00000457039 REXO2Q9Y3B8 237 aaKnown RBP14.62□□□□□ -0.07
SMPD4-215ENST00000457039 PCDHA13Q9Y5I0 950 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 SNX10Q9Y5X0 201 aa14.62□□□□□ -0.07
SMPD4-215ENST00000457039 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-215ENST00000457039 F5H5T6 163 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 TBL1XO60907 577 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 LRCH4O75427 683 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 MTA2O94776 668 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 EGFP01133 1207 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 CHRM1P11229 460 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-215ENST00000457039 DRD1P21728 446 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 NRG1Q02297 640 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-215ENST00000457039 PIGHQ14442 188 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-215ENST00000457039 CYP4V2Q6ZWL3 525 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-215ENST00000457039 TMEM105Q8N8V8 129 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 IGSF8Q969P0 613 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 EXOC4Q96A65 974 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 BTBD6Q96KE9 485 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 SLC2A11Q9BYW1 496 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 OSBPL2Q9H1P3 480 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 OSGEPQ9NPF4 335 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 DNAJC17Q9NVM6 304 aaKnown RBP14.61□□□□□ -0.07
SMPD4-215ENST00000457039 CTTNBP2NLQ9P2B4 639 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 SIT1Q9Y3P8 196 aa14.61□□□□□ -0.07
SMPD4-215ENST00000457039 MIA3Q5JRA6 1907 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 IGLV3-10A0A075B6K4 115 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 DRGXA6NNA5 263 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 K7EQS6 105 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 MYO1FO00160 1098 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 STK25O00506 426 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 KAT7O95251 611 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 DESP17661 470 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 MIPP30301 263 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 PCK1P35558 622 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 GRIA2P42262 883 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 RPS9P46781 194 aaKnown RBP14.6□□□□□ -0.07
SMPD4-215ENST00000457039 DGKGP49619 791 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 IRAK1P51617 712 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 AIF1P55008 147 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 KDSRQ06136 332 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 GRSF1Q12849 480 aaKnown RBP eCLIP14.6□□□□□ -0.07
SMPD4-215ENST00000457039 GSE1Q14687 1217 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 SPA17Q15506 151 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 ARL13BQ3SXY8 428 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 DGKKQ5KSL6 1271 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 MANEALQ5VSG8 457 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 GRAMD4Q6IC98 578 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 SLFN11Q7Z7L1 901 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 SFTPA1Q8IWL2 248 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 RHOT2Q8IXI1 618 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 CFAP52Q8N1V2 620 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 TERB1Q8NA31 727 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 SLC35G2Q8TBE7 412 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 WFDC5Q8TCV5 224 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 RFFLQ8WZ73 363 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 LMLNQ96KR4 655 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 PEBP4Q96S96 227 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 LRFN3Q9BTN0 628 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 MAGEB5Q9BZ81 275 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 SIK2Q9H0K1 926 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 LMAN1LQ9HAT1 526 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 ARHGEF4Q9NR80 690 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 RBM12Q9NTZ6 932 aaKnown RBP14.6□□□□□ -0.07
SMPD4-215ENST00000457039 IP6K2Q9UHH9 426 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 VANGL2Q9ULK5 521 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 FZD10Q9ULW2 581 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 SLC27A6Q9Y2P4 619 aa14.6□□□□□ -0.07
SMPD4-215ENST00000457039 RCCD1A6NED2 376 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 ANTXRLA6NF34 631 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 NCAM2O15394 837 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 RNF8O76064 485 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 LUC7L3O95232 432 aaKnown RBP14.59□□□□□ -0.07
SMPD4-215ENST00000457039 APODP05090 189 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 DCNP07585 359 aaKnown RBP14.59□□□□□ -0.07
SMPD4-215ENST00000457039 TCF4P15884 667 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 LRRC32Q14392 662 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 GAS6Q14393 721 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 RABGAP1LQ5R372 815 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 TTC39BQ5VTQ0 682 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-215ENST00000457039 DAB2IPQ5VWQ8 1189 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 SCYL2Q6P3W7 929 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 KIAA0907Q7Z7F0 614 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-215ENST00000457039 LRRC8AQ8IWT6 810 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 SYNPOQ8N3V7 929 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.59□□□□□ -0.07
SMPD4-215ENST00000457039 ACRBPQ8NEB7 543 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 FIBINQ8TAL6 211 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms