RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 ZNF197O14709 1029 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 TLR2O60603 784 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 NOS1APO75052 506 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 COQ9O75208 318 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 PRLP01236 227 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ITIH1P19827 911 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 NAMPTP43490 491 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 NPY2RP49146 381 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 HARS2P49590 506 aaKnown RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ARHGAP8P85298 464 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 NSUN2Q08J23 767 aaKnown RBP eCLIP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 TRIM32Q13049 653 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 GTF2H3Q13889 308 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 DLGAP5Q15398 846 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 TAF5Q15542 800 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 MAPRE1Q15691 268 aaKnown RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 VPS72Q15906 364 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 NADK2Q4G0N4 442 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ATP6AP1LQ52LC2 224 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 TNFAIP8L3Q5GJ75 292 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 MZT2AQ6P582 158 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 GALNT18Q6P9A2 607 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ADGRD1Q6QNK2 874 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 POTEHQ6S545 545 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 DENND5BQ6ZUT9 1274 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ZNF720Q7Z2F6 126 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ANKS1BQ7Z6G8 1248 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 STRA8Q7Z7C7 330 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 PDSS2Q86YH6 399 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 CCDC36Q8IYA8 594 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 SEPT12Q8IYM1 358 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 PM20D2Q8IYS1 436 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 UBASH3BQ8TF42 649 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 TMCO6Q96DC7 493 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 MBOAT7Q96N66 472 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 FAM118BQ9BPY3 351 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 KATNAL1Q9BW62 490 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 EPB41L1Q9H4G0 881 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 MTMR4Q9NYA4 1195 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 FBXO9Q9UK97 447 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 MAGED2Q9UNF1 606 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 AAR2Q9Y312 384 aaKnown RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 PEX16Q9Y5Y5 336 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ROBO3Q96MS0 1386 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ROBO2Q9HCK4 1378 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ASTN2O75129 1339 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 DCAF8L1A6NGE4 600 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 SPDYE16A6NNV3 312 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ZNF263O14978 683 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ATG7O95352 703 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 LRPAP1P30533 357 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 YWHABP31946 246 aaKnown RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 CRHR1P34998 444 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 RPL22P35268 128 aaKnown RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 MYBPC3Q14896 1274 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ZYXQ15942 572 aaKnown RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 SPDYE2Q495Y8 402 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 GPAT2Q6NUI2 795 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 CRTC3Q6UUV7 619 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ANGPTL8Q6UXH0 198 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ZBTB33Q86T24 672 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 KBTBD2Q8IY47 623 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 OR6B3Q8NGW1 331 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 WDR36Q8NI36 951 aaKnown RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 RNF139Q8WU17 664 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 SLC20A1Q8WUM9 679 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 AP3S1Q92572 193 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 DDX17Q92841 729 aaKnown RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 PNMA5Q96PV4 448 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 PPP1R10Q96QC0 940 aaKnown RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 NMRAL1Q9HBL8 299 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 FBXO6Q9NRD1 293 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 EHD3Q9NZN3 535 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 DOLKQ9UPQ8 538 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 PCDHA10Q9Y5I2 948 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 PTPRMP28827 1452 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 SPDYE2BA6NHP3 402 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ERI2A8K979 691 aaKnown RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 DCDC2CA8MYV0 355 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 H0YJX3 145 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 RNF225M0QZC1 329 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 BTN3A3O00478 584 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 KLF11O14901 512 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 AVILO75366 819 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 DNAJB5O75953 348 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 GPIP06744 558 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 SPDYE6P0CI01 402 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 HOXA13P31271 388 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-203ENST00000456367 GEMP55040 296 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 TPI1P60174 286 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 CSNK2BP67870 215 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 KLF10Q13118 480 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 DPYSL3Q14195 570 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 NFIL3Q16649 462 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 C5orf22Q49AR2 442 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 ARHGAP17Q68EM7 881 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 XRRA1Q6P2D8 792 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 C16orf46Q6P387 395 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 DSTYKQ6XUX3 929 aa5.11□□□□□ -1.59
PCDH9-203ENST00000456367 C16orf86Q6ZW13 317 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms