RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 DPP6P42658 865 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 SLC6A3Q01959 620 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 EIF4EBP2Q13542 120 aaPredicted RBP22■■□□□ 1.11
HMGB3-205ENST00000455596 MBLAC2Q68D91 279 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 TCEAL6Q6IPX3 200 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 ZDHHC17Q8IUH5 632 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 CCDC117Q8IWD4 279 aaPredicted RBP22■■□□□ 1.11
HMGB3-205ENST00000455596 ANKRD20A12PQ8NF67 263 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 FIBINQ8TAL6 211 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 TCEAL3Q969E4 200 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 PRDM16Q9HAZ2 1276 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 DDIT4Q9NX09 232 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 XPO7Q9UIA9 1087 aaKnown RBP22■■□□□ 1.11
HMGB3-205ENST00000455596 ADAMTS9Q9P2N4 1935 aa22■■□□□ 1.11
HMGB3-205ENST00000455596 DCDC2BA2VCK2 349 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 F8VZ95 297 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 KHNYNO15037 678 aaKnown RBP21.99■■□□□ 1.11
HMGB3-205ENST00000455596 ATP5BP06576 529 aaKnown RBP21.99■■□□□ 1.11
HMGB3-205ENST00000455596 SLC2A3P11169 496 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 POLR2EP19388 210 aaKnown RBP21.99■■□□□ 1.11
HMGB3-205ENST00000455596 CDH5P33151 784 aaPredicted RBP21.99■■□□□ 1.11
HMGB3-205ENST00000455596 PTGER3P43115 390 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 RPS24P62847 133 aaKnown RBP21.99■■□□□ 1.11
HMGB3-205ENST00000455596 MYL5Q02045 173 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 FNDC3BQ53EP0 1204 aaKnown RBP21.99■■□□□ 1.11
HMGB3-205ENST00000455596 LYSMD4Q5XG99 296 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 RAP1GAP2Q684P5 730 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 IL31Q6EBC2 164 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 SLC26A9Q7LBE3 791 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 METTL3Q86U44 580 aaKnown RBP21.99■■□□□ 1.11
HMGB3-205ENST00000455596 CHSY1Q86X52 802 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 LGI2Q8N0V4 545 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 CARNMT1Q8N4J0 409 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 ZNF397Q8NF99 534 aaPredicted RBP21.99■■□□□ 1.11
HMGB3-205ENST00000455596 CYB5D2Q8WUJ1 264 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 MYEOVQ96EZ4 313 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 GANQ9H2C0 597 aa21.99■■□□□ 1.11
HMGB3-205ENST00000455596 SYNJ2BP-COX16A0A087WUM0 186 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 KCNU1A8MYU2 1149 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 NDUFS2O75306 463 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 DAB1O75553 588 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 ABCB4P21439 1286 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 TACR2P21452 398 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 CCR1P32246 355 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 CDH18Q13634 790 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 TAF3Q5VWG9 929 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 TMPRSS6Q8IU80 811 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 SYT12Q8IV01 421 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 CFAP52Q8N1V2 620 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 PRCCQ92733 491 aaPredicted RBP21.98■■□□□ 1.11
HMGB3-205ENST00000455596 RNF34Q969K3 372 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 EDEM2Q9BV94 578 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 MKRN2Q9H000 416 aaKnown RBP21.98■■□□□ 1.11
HMGB3-205ENST00000455596 TMEM245Q9H330 911 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 CD93Q9NPY3 652 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 COX16Q9P0S2 106 aa21.98■■□□□ 1.11
HMGB3-205ENST00000455596 F5H5T6 163 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 LUC7L3O95232 432 aaKnown RBP21.97■■□□□ 1.11
HMGB3-205ENST00000455596 DLDP09622 509 aaKnown RBP21.97■■□□□ 1.11
HMGB3-205ENST00000455596 HLA-EP13747 358 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 NOS2P35228 1153 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 KLK7P49862 253 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 COPB1P53618 953 aaKnown RBP21.97■■□□□ 1.11
HMGB3-205ENST00000455596 COPAP53621 1224 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 ZNF33AQ06730 810 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 LMAN2Q12907 356 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 PTPRNQ16849 979 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 STPG1Q5TH74 334 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 NOP9Q86U38 636 aaKnown RBP21.97■■□□□ 1.11
HMGB3-205ENST00000455596 ERICH1Q86X53 443 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 DEFB119Q8N690 84 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 DDX1Q92499 740 aaKnown RBP21.97■■□□□ 1.11
HMGB3-205ENST00000455596 SIPA1Q96FS4 1042 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 LMLNQ96KR4 655 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 ITM2CQ9NQX7 267 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 USP36Q9P275 1121 aaKnown RBP21.97■■□□□ 1.11
HMGB3-205ENST00000455596 LIMA1Q9UHB6 759 aaKnown RBP21.97■■□□□ 1.11
HMGB3-205ENST00000455596 DAAM1Q9Y4D1 1078 aa21.97■■□□□ 1.11
HMGB3-205ENST00000455596 MED19A0JLT2 244 aaPredicted RBP21.96■■□□□ 1.11
HMGB3-205ENST00000455596 LNP1A1A4G5 178 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 PATE3B3GLJ2 98 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 H0Y626 953 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 LSM8O95777 96 aaKnown RBP21.96■■□□□ 1.11
HMGB3-205ENST00000455596 GABRB2P47870 512 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 POLR2FP61218 127 aaKnown RBP21.96■■□□□ 1.11
HMGB3-205ENST00000455596 NME3Q13232 169 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 MTA1Q13330 715 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 CAMK2GQ13555 558 aaPredicted RBP21.96■■□□□ 1.11
HMGB3-205ENST00000455596 MSANTD4Q8NCY6 345 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 EPS8L1Q8TE68 723 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 C18orf8Q96DM3 657 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 FAM207AQ9NSI2 230 aaPredicted RBP21.96■■□□□ 1.11
HMGB3-205ENST00000455596 TMEM74BQ9NUR3 256 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 RRN3Q9NYV6 651 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 EVLQ9UI08 416 aaPredicted RBP21.96■■□□□ 1.11
HMGB3-205ENST00000455596 PILRBQ9UKJ0 227 aa21.96■■□□□ 1.11
HMGB3-205ENST00000455596 ATXN2Q99700 1313 aaKnown RBP21.96■■□□□ 1.11
HMGB3-205ENST00000455596 M0QYT0 321 aa21.95■■□□□ 1.1
HMGB3-205ENST00000455596 GFPT2O94808 682 aa21.95■■□□□ 1.1
HMGB3-205ENST00000455596 MMEP08473 750 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms