RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 CLCN6P51797 869 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 ATXN1P54253 815 aaKnown RBP20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 USP46P62068 366 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 PITX1P78337 314 aaPredicted RBP20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 PTK6Q13882 451 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 LLGL1Q15334 1064 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 ATAT1Q5SQI0 421 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 RARS2Q5T160 578 aaKnown RBP20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 SNX30Q5VWJ9 437 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 TTC27Q6P3X3 843 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 EMBQ6PCB8 327 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 GSTA5Q7RTV2 222 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 ANKS1BQ7Z6G8 1248 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 SLC35B2Q8TB61 432 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 ADAM32Q8TC27 787 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 ACTL9Q8TC94 416 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 HDAC7Q8WUI4 952 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 MYRFLQ96LU7 910 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 HAPLN3Q96S86 360 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 KCTD15Q96SI1 283 aaPredicted RBP20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 OSBPL2Q9H1P3 480 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 NMUR1Q9HB89 426 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 ARHGEF38Q9NXL2 777 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 SLC12A6Q9UHW9 1150 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 ZNF148Q9UQR1 794 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 R3HDM2Q9Y2K5 976 aaKnown RBP20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 RAD54BQ9Y620 910 aa20.25■□□□□ 0.83
HIGD1A-204ENST00000452906 BHMG1C9JSJ3 638 aaPredicted RBP20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 EEF2KO00418 725 aaKnown RBP20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 TEX28O15482 410 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 RARGP13631 454 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 HOXD11P31277 338 aaPredicted RBP20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 TUBP50607 506 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 CLCN4P51793 760 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 DYNLT1P63172 113 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 OTUD4Q01804 1114 aaKnown RBP20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 SNX1Q13596 522 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 NOMO1Q15155 1222 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 CA9Q16790 459 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 GIPC2Q8TF65 315 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 ATG4AQ8WYN0 398 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 CSPG4P5Q96PW8 444 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 FERMT1Q9BQL6 677 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 TKTL2Q9H0I9 626 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 TRPM5Q9NZQ8 1165 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 CALCOCO1Q9P1Z2 691 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 INSL5Q9Y5Q6 135 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 CLUHO75153 1309 aa20.24■□□□□ 0.83
HIGD1A-204ENST00000452906 DAPK3O43293 454 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 ATP8B1O43520 1251 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 SOAT2O75908 522 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 SEC24AO95486 1093 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 GLUD1P00367 558 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 TPI1P60174 286 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 CAV1Q03135 178 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 CALCOCO2Q13137 446 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 MMRN1Q13201 1228 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 XRCC4Q13426 336 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 EIF4EBP2Q13542 120 aaPredicted RBP20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 HLTFQ14527 1009 aaKnown RBP eCLIP20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 TRIP4Q15650 581 aaPredicted RBP20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 DUPD1Q68J44 220 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 KLHDC10Q6PID8 442 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 PBXIP1Q96AQ6 731 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 ZNF512Q96ME7 567 aaPredicted RBP20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 DONSONQ9NYP3 566 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 CDH22Q9UJ99 828 aa20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 MAGED2Q9UNF1 606 aaPredicted RBP20.23■□□□□ 0.83
HIGD1A-204ENST00000452906 IL4RP24394 825 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 STIP1P31948 543 aaKnown RBP20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 SERPINB6P35237 376 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 TBX4P57082 545 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 EIF3EP60228 445 aaKnown RBP20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 NRG1Q02297 640 aaPredicted RBP20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 RING1Q06587 406 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 ADCY2Q08462 1091 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 OASLQ15646 514 aaKnown RBP20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 PABPC1LQ4VXU2 614 aaKnown RBP20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 C10orf120Q5SQS8 335 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 RFX8Q6ZV50 586 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 CDKL3Q8IVW4 592 aaPredicted RBP20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 ELMOD1Q8N336 334 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 PLD5Q8N7P1 536 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 C12orf76Q8N812 135 aaPredicted RBP20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 ATP6V0D2Q8N8Y2 350 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 PCDH19Q8TAB3 1148 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 GPR152Q8TDT2 470 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 IFT81Q8WYA0 676 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 TRIM51Q9BSJ1 452 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 CWC15Q9P013 229 aaKnown RBP20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 MARCH2Q9P0N8 246 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 ASIC3Q9UHC3 531 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 DNPEPQ9ULA0 475 aa20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 HBS1LQ9Y450 684 aaKnown RBP20.22■□□□□ 0.83
HIGD1A-204ENST00000452906 HACD1B0YJ81 288 aa20.21■□□□□ 0.83
HIGD1A-204ENST00000452906 C2CD4DB7Z1M9 353 aa20.21■□□□□ 0.83
HIGD1A-204ENST00000452906 FGF10O15520 208 aaPredicted RBP20.21■□□□□ 0.83
HIGD1A-204ENST00000452906 CREB3O43889 395 aa20.21■□□□□ 0.83
HIGD1A-204ENST00000452906 ZMYND10O75800 440 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms