RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 PRKCHP24723 683 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 PON1P27169 355 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 SLC6A4P31645 630 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 GPD2P43304 727 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 SLC11A2P49281 568 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 NUMBP49757 651 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 IRX4P78413 519 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 PDCLQ13371 301 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 ZNF234Q14588 700 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 FUT11Q495W5 492 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 FNDC3BQ53EP0 1204 aaKnown RBP9.02□□□□□ -0.97
RFX3-209ENST00000451859 TRIM61Q5EBN2 209 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 ADGRF1Q5T601 910 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 NUGGCQ68CJ6 796 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 TMEM215Q68D42 235 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 CHST9Q7L1S5 443 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 TAC4Q86UU9 113 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 FAM217AQ8IXS0 508 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 SCML4Q8N228 414 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 WFDC5Q8TCV5 224 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 DQX1Q8TE96 717 aaKnown RBP9.02□□□□□ -0.97
RFX3-209ENST00000451859 ZNF606Q8WXB4 792 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 TMA16Q96EY4 203 aaKnown RBP9.02□□□□□ -0.97
RFX3-209ENST00000451859 PIWIL1Q96J94 861 aaKnown RBP9.02□□□□□ -0.97
RFX3-209ENST00000451859 MRGPRX1Q96LB2 322 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 HSPA12BQ96MM6 686 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 PRDM16Q9HAZ2 1276 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 TMEM74BQ9NUR3 256 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 ABCB8Q9NUT2 735 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 ELOVL2Q9NXB9 296 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 COX16Q9P0S2 106 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 THAP10Q9P2Z0 257 aaPredicted RBP9.02□□□□□ -0.97
RFX3-209ENST00000451859 CYTH4Q9UIA0 394 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 FBXO10Q9UK96 956 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 DNAJC12Q9UKB3 198 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 CNTN6Q9UQ52 1028 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 SLC27A6Q9Y2P4 619 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 TPRP12270 2363 aaKnown RBP9.02□□□□□ -0.97
RFX3-209ENST00000451859 KNL1Q8NG31 2342 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 PAPSS1O43252 624 aaPredicted RBP9.01□□□□□ -0.97
RFX3-209ENST00000451859 AP5Z1O43299 807 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 ACSL4O60488 711 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 SYNCRIPO60506 623 aaKnown RBP9.01□□□□□ -0.97
RFX3-209ENST00000451859 GRAP2O75791 330 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 FYNP06241 537 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 HLA-FP30511 346 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 ACADSBP45954 432 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 MAP1BP46821 2468 aaKnown RBP9.01□□□□□ -0.97
RFX3-209ENST00000451859 LIMK1P53667 647 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 RPS24P62847 133 aaKnown RBP9.01□□□□□ -0.97
RFX3-209ENST00000451859 RAPGEF1Q13905 1077 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 TAF5Q15542 800 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 MAN2A1Q16706 1144 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 FAM133BQ5BKY9 247 aaKnown RBP9.01□□□□□ -0.97
RFX3-209ENST00000451859 SYPL2Q5VXT5 272 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 SLC36A4Q6YBV0 504 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 ENOSF1Q7L5Y1 443 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 FAM124AQ86V42 546 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 TMPRSS6Q8IU80 811 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 SYT12Q8IV01 421 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 FAM114A1Q8IWE2 563 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 UNC45BQ8IWX7 931 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 RGL4Q8IZJ4 473 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 CFAP52Q8N1V2 620 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 CARNMT1Q8N4J0 409 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 SHC3Q92529 594 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 FCRL2Q96LA5 508 aaPredicted RBP9.01□□□□□ -0.97
RFX3-209ENST00000451859 PRICKLE1Q96MT3 831 aaPredicted RBP9.01□□□□□ -0.97
RFX3-209ENST00000451859 SERPINB11Q96P15 392 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 MKRN2Q9H000 416 aaKnown RBP9.01□□□□□ -0.97
RFX3-209ENST00000451859 NUCKS1Q9H1E3 243 aaKnown RBP9.01□□□□□ -0.97
RFX3-209ENST00000451859 THAP9Q9H5L6 903 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 FAM204AQ9H8W3 233 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 CD248Q9HCU0 757 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 SIX2Q9NPC8 291 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 TMEM9BQ9NQ34 198 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 PLCB1Q9NQ66 1216 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 PRDM9Q9NQV7 894 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 XPO7Q9UIA9 1087 aaKnown RBP9.01□□□□□ -0.97
RFX3-209ENST00000451859 GGA2Q9UJY4 613 aa9.01□□□□□ -0.97
RFX3-209ENST00000451859 TTC24A2A3L6 582 aaPredicted RBP9□□□□□ -0.97
RFX3-209ENST00000451859 TYW5A2RUC4 315 aaKnown RBP9□□□□□ -0.97
RFX3-209ENST00000451859 GTPBP10A4D1E9 387 aaKnown RBP9□□□□□ -0.97
RFX3-209ENST00000451859 MEI4A8MW99 385 aa9□□□□□ -0.97
RFX3-209ENST00000451859 KCNJ18B7U540 433 aa9□□□□□ -0.97
RFX3-209ENST00000451859 GFRA2O00451 464 aa9□□□□□ -0.97
RFX3-209ENST00000451859 SART1O43290 800 aaKnown RBP9□□□□□ -0.97
RFX3-209ENST00000451859 ZNF217O75362 1048 aa9□□□□□ -0.97
RFX3-209ENST00000451859 LATS1O95835 1130 aa9□□□□□ -0.97
RFX3-209ENST00000451859 IGLV3-27P01718 113 aa9□□□□□ -0.97
RFX3-209ENST00000451859 APOEP02649 317 aa9□□□□□ -0.97
RFX3-209ENST00000451859 PABPC1P11940 636 aaKnown RBP9□□□□□ -0.97
RFX3-209ENST00000451859 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
RFX3-209ENST00000451859 CD70P32970 193 aa9□□□□□ -0.97
RFX3-209ENST00000451859 ZNF445P59923 1031 aa9□□□□□ -0.97
RFX3-209ENST00000451859 PITX1P78337 314 aaPredicted RBP9□□□□□ -0.97
RFX3-209ENST00000451859 ZNF33AQ06730 810 aa9□□□□□ -0.97
RFX3-209ENST00000451859 CDH18Q13634 790 aa9□□□□□ -0.97
RFX3-209ENST00000451859 KCNJ12Q14500 433 aa9□□□□□ -0.97
RFX3-209ENST00000451859 EIF4HQ15056 248 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms