RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 CDH18Q13634 790 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 EIF4HQ15056 248 aaKnown RBP12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 CLEC16AQ2KHT3 1053 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 MS4A13Q5J8X5 152 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 LAIR1Q6GTX8 287 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 SDE2Q6IQ49 451 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 PHLDB2Q86SQ0 1253 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 CFAP52Q8N1V2 620 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 PGBD3Q8N328 593 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 FAM160A2Q8N612 972 aaPredicted RBP12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 UCMAQ8WVF2 138 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 SORCS1Q8WY21 1168 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 BAP1Q92560 729 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 ADAM33Q9BZ11 813 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 CALCOCO1Q9P1Z2 691 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 GGA2Q9UJY4 613 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 INVSQ9Y283 1065 aa12.36□□□□□ -0.43
LSP1P3-201ENST00000449530 RALGAPA1Q6GYQ0 2036 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 A0A1W2PQC6 194 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 A0A1W2PQF6 199 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 LRRC53A6NM62 1247 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 KCNU1A8MYU2 1149 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 DCLK1O15075 740 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 LUC7L3O95232 432 aaKnown RBP12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 CAVIN2O95810 425 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 PABPC1P11940 636 aaKnown RBP12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 MMP8P22894 467 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 CD70P32970 193 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 GGCXP38435 758 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 IL12RB1P42701 662 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 CENPCQ03188 943 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 EIF4EBP2Q13542 120 aaPredicted RBP12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 ASIC2Q16515 512 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 MPP7Q5T2T1 576 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 TMEM215Q68D42 235 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 RNF43Q68DV7 783 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 TRNP1Q6NT89 227 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 KIAA1211LQ6NV74 962 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 CHST9Q7L1S5 443 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 KBTBD6Q86V97 674 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 CIR1Q86X95 450 aaPredicted RBP12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 AHI1Q8N157 1196 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 CARNMT1Q8N4J0 409 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 EMC1Q8N766 993 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 WFIKKN2Q8TEU8 576 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 CYB5D2Q8WUJ1 264 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 TBCBQ99426 244 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 NPY6RQ99463 290 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 GABRG3Q99928 467 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 PIGVQ9NUD9 493 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 ELOVL2Q9NXB9 296 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 RRN3Q9NYV6 651 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 THAP10Q9P2Z0 257 aaPredicted RBP12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 SLC12A6Q9UHW9 1150 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 STON1Q9Y6Q2 735 aa12.35□□□□□ -0.43
LSP1P3-201ENST00000449530 THADAQ6YHU6 1953 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 WASH3PC4AMC7 463 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 PAGE1O75459 146 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 GJB6O95452 261 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 CCDC172P0C7W6 258 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 UNGP13051 313 aaPredicted RBP12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 GABRG2P18507 467 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 PRKCHP24723 683 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 DEUP1Q05D60 604 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 LMAN2Q12907 356 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 ZNF234Q14588 700 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 STARD3Q14849 445 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 FUT11Q495W5 492 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 FNDC3BQ53EP0 1204 aaKnown RBP12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 USP39Q53GS9 565 aaKnown RBP12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 E4F1Q66K89 784 aaPredicted RBP12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 MBLAC2Q68D91 279 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 SERPINA13PQ6UXR4 307 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 SND1Q7KZF4 910 aaKnown RBP eCLIP12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 PHF13Q86YI8 300 aaPredicted RBP12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 CCDC117Q8IWD4 279 aaPredicted RBP12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 ZNF557Q8N988 423 aaPredicted RBP12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 RLN3Q8WXF3 142 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 SPACA7Q96KW9 195 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 CFAP57Q96MR6 1250 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 PRMT1Q99873 361 aaKnown RBP12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 SLC6A17Q9H1V8 727 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 ADAM22Q9P0K1 906 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 TMEM59LQ9UK28 342 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 MYO6Q9UM54 1294 aa12.34□□□□□ -0.43
LSP1P3-201ENST00000449530 TNRC6BQ9UPQ9 1833 aaKnown RBP12.33□□□□□ -0.44
LSP1P3-201ENST00000449530 H0Y626 953 aa12.33□□□□□ -0.44
LSP1P3-201ENST00000449530 NPC1O15118 1278 aa12.33□□□□□ -0.44
LSP1P3-201ENST00000449530 ADCY5O95622 1261 aa12.33□□□□□ -0.44
LSP1P3-201ENST00000449530 CALB1P05937 261 aa12.33□□□□□ -0.44
LSP1P3-201ENST00000449530 HLA-EP13747 358 aa12.33□□□□□ -0.44
LSP1P3-201ENST00000449530 NDUFV2P19404 249 aa12.33□□□□□ -0.44
LSP1P3-201ENST00000449530 BCKDHBP21953 392 aa12.33□□□□□ -0.44
LSP1P3-201ENST00000449530 CXCR3P49682 368 aa12.33□□□□□ -0.44
LSP1P3-201ENST00000449530 IRAK1P51617 712 aa12.33□□□□□ -0.44
LSP1P3-201ENST00000449530 ATXN1P54253 815 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms