RNA–Protein interactions for RNA: ENST00000449260.6

PMEL-201, Transcript of premelanosome protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PMEL, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-201ENST00000449260 CTAGE3PQ8IX95 158 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 MPP5Q8N3R9 675 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 PPM1EQ8WY54 764 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 PGAP3Q96FM1 320 aaPredicted RBP13.16□□□□□ -0.3
PMEL-201ENST00000449260 SCLYQ96I15 445 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 SIGLEC10Q96LC7 697 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 PKMYT1Q99640 499 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 COLEC11Q9BWP8 271 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 WDCPQ9H6R7 721 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 DMAP1Q9NPF5 467 aaPredicted RBP13.16□□□□□ -0.3
PMEL-201ENST00000449260 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 RRN3Q9NYV6 651 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 PPP1R12AO14974 1030 aaPredicted RBP13.16□□□□□ -0.3
PMEL-201ENST00000449260 KIF1CO43896 1103 aaKnown RBP13.16□□□□□ -0.3
PMEL-201ENST00000449260 NBNO60934 754 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 FAM155BO75949 473 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 F9P00740 461 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 AIF1P55008 147 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 PM20D1Q6GTS8 502 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 ANKRD33Q7Z3H0 272 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 NLRC5Q86WI3 1866 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 PPM1NQ8N819 430 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 SCAMP5Q8TAC9 235 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 IRGQQ8WZA9 623 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 CCT6BQ92526 530 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 LRRC39Q96DD0 335 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 FERMT1Q9BQL6 677 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 TRIM56Q9BRZ2 755 aaKnown RBP13.16□□□□□ -0.3
PMEL-201ENST00000449260 C11orf49Q9H6J7 331 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 PLAC1Q9HBJ0 212 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 RGS18Q9NS28 235 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 GRID1Q9ULK0 1009 aa13.16□□□□□ -0.3
PMEL-201ENST00000449260 USP15Q9Y4E8 981 aaPredicted RBP13.16□□□□□ -0.3
PMEL-201ENST00000449260 SF3B1O75533 1304 aaKnown RBP eCLIP13.15□□□□□ -0.3
PMEL-201ENST00000449260 IQANK1A0A1B0GTG1 560 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 CXorf49A8MYA2 514 aaPredicted RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 TRDMT1O14717 391 aaKnown RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 DDHD2O94830 711 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 MAGEA3P43357 314 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 GLUD2P49448 558 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 SARNPP82979 210 aaKnown RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 TSPY1Q01534 308 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 SCAPQ12770 1279 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 IFRD2Q12894 506 aaPredicted RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 SEMA3BQ13214 749 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 SEPT7Q16181 437 aaKnown RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 SPRED3Q2MJR0 410 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 LVRNQ6Q4G3 990 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 GLB1LQ6UWU2 654 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 UNC5AQ6ZN44 842 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 FAM47EQ6ZV65 393 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 PDCD7Q8N8D1 485 aaKnown RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 RNF34Q969K3 372 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 EBNA1BP2Q99848 306 aaKnown RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 TKTL2Q9H0I9 626 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 SSU72Q9NP77 194 aaKnown RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 CAPN7Q9Y6W3 813 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 B4GALT3O60512 393 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 OPHN1O60890 802 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 OAS1P00973 400 aaKnown RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 COL6A1P12109 1028 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 PAX3P23760 479 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 CYP2C18P33260 490 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 CXCR3P49682 368 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 WASHC5Q12768 1159 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 MAPRE1Q15691 268 aaKnown RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 PDZD4Q76G19 769 aaPredicted RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 SPATA21Q7Z572 469 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 TAC4Q86UU9 113 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 DBF4BQ8NFT6 615 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 SERAC1Q96JX3 654 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 PITPNM3Q9BZ71 974 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
PMEL-201ENST00000449260 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.3
PMEL-201ENST00000449260 ARHGEF37A1IGU5 675 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 SUN1O94901 812 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 ZWINTO95229 277 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 APOEP02649 317 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 C1QAP02745 245 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 GSTA2P09210 222 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 OR4Q2P0C623 313 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 TYMPP19971 482 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 PRKCHP24723 683 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 PSMB4P28070 264 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 HCAR3P49019 387 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 SATB1Q01826 763 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 YWHAHQ04917 246 aaPredicted RBP13.14□□□□□ -0.31
PMEL-201ENST00000449260 ACTN3Q08043 901 aaPredicted RBP13.14□□□□□ -0.31
PMEL-201ENST00000449260 DNAJC3Q13217 504 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 TTC31Q49AM3 519 aaPredicted RBP13.14□□□□□ -0.31
PMEL-201ENST00000449260 CLLU1OSQ5K130 101 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 SWT1Q5T5J6 900 aaKnown RBP13.14□□□□□ -0.31
PMEL-201ENST00000449260 SLC24A5Q71RS6 500 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 PID1Q7Z2X4 250 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 CCDC91Q7Z6B0 441 aa13.14□□□□□ -0.31
PMEL-201ENST00000449260 DEFB128Q7Z7B8 93 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms