RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ALDH7A1P49419 539 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 RPL10AP62906 217 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 CDK16Q00536 496 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 SLC10A2Q12908 348 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 PPP2R5DQ14738 602 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 TPSAB1Q15661 275 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 SKIDA1Q1XH10 827 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 TNFAIP8L3Q5GJ75 292 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 ACBD5Q5T8D3 534 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 TMEM164Q5U3C3 297 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 LRRC39Q96DD0 335 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 SPATA17Q96L03 361 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 VPS37BQ9H9H4 285 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 OLA1Q9NTK5 396 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 ARHGEF38Q9NXL2 777 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 OR12D3Q9UGF7 316 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 FETUBQ9UGM5 382 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 LGALS13Q9UHV8 139 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 TET1Q8NFU7 2136 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 A0A0A0MRY4 1105 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 EXOC1LA0A1B0GW35 172 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 SMIM23A6NLE4 172 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 ZBBXA8MT70 800 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 GOLGA8MH3BSY2 632 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 FGF10O15520 208 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 MFSD11O43934 449 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 YWHAQP27348 245 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 ATP1A2P50993 1020 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 IRAK1P51617 712 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 COG7P83436 770 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 ZNF33AQ06730 810 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 IFRD2Q12894 506 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 MTA1Q13330 715 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 EIF4EBP2Q13542 120 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 PRKD1Q15139 912 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 RASA2Q15283 850 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 LONRF1Q17RB8 773 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 KLHL38Q2WGJ6 581 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 CCDC38Q502W7 563 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 ANKRD22Q5VYY1 191 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 MSANTD2Q6P1R3 559 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 FBXO46Q6PJ61 603 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 DENND5BQ6ZUT9 1274 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 DEFB128Q7Z7B8 93 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 TDRPQ86YL5 185 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 PALM2Q8IXS6 379 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 SPATA13Q96N96 652 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 CATSPERBQ9H7T0 1116 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 LRRC4CQ9HCJ2 640 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 TMEM39AQ9NV64 488 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 DONSONQ9NYP3 566 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 IL37Q9NZH6 218 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 SLC24A2Q9UI40 661 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 TBX21Q9UL17 535 aa10.89□□□□□ -0.67
VIPAS39-203ENST00000448935 ABHD14A-ACY1A0A1B0GW23 586 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 MTMR11A4FU01 709 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 TBC1D4O60343 1298 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 TMEM63AO94886 807 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 GSTA2P09210 222 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 CLTBP09497 229 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 EPHB2P29323 1055 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 SLCO1A2P46721 670 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 GATMP50440 423 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 AP1B1Q10567 949 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 SEMA5AQ13591 1074 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 TCTN1Q2MV58 587 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 USP41Q3LFD5 358 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 BBS9Q3SYG4 887 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 LYPD8Q6UX82 237 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 CTU1Q7Z7A3 348 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 SCD5Q86SK9 330 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 CNPY4Q8N129 248 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 LZTR1Q8N653 840 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 CCNYQ8ND76 341 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 CCDC110Q8TBZ0 833 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 CENPTQ96BT3 561 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 ZNF333Q96JL9 665 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 VAT1Q99536 393 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 MAGEB5Q9BZ81 275 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 ETNK1Q9HBU6 452 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 XAB2Q9HCS7 855 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 TLR8Q9NR97 1041 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 CLIC5Q9NZA1 410 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 SLC12A6Q9UHW9 1150 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 ZMYND8Q9ULU4 1186 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 TLR6Q9Y2C9 796 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 ATP11BQ9Y2G3 1177 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 BACE2Q9Y5Z0 518 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 ACTL7BQ9Y614 415 aa10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 ZNF638Q14966 1978 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-203ENST00000448935 A0A1W2PQH9 124 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 FAM92AA1XBS5 289 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 SNPHO15079 494 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 LRIG2O94898 1065 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 MAP3K6O95382 1288 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 AMHP03971 560 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 APRTP07741 180 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 HAPLN1P10915 354 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 MLNP12872 115 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms