RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SPAG17Q6Q759 2223 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 A0A087X0T9 212 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 TCRBV5S1A1TA0A578 114 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 SIGLEC16A6NMB1 481 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 I6L893 689 aaPredicted RBP12.33□□□□□ -0.44
RFC4-208ENST00000447345 CCP110O43303 1012 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 ATG13O75143 517 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 RTN2O75298 545 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 F9P00740 461 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 FAM228BP0C875 321 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 EIF4A3P38919 411 aaKnown RBP12.33□□□□□ -0.44
RFC4-208ENST00000447345 TNFRSF4P43489 277 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 PXNP49023 591 aaPredicted RBP12.33□□□□□ -0.44
RFC4-208ENST00000447345 CXCR3P49682 368 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 GFPT1Q06210 699 aaPredicted RBP12.33□□□□□ -0.44
RFC4-208ENST00000447345 DMWDQ09019 674 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 CDH18Q13634 790 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 BRMS1LQ5PSV4 323 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 EGFLAMQ63HQ2 1017 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 PPP1R2P3Q6NXS1 205 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 WDR59Q6PJI9 974 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 NUDT18Q6ZVK8 323 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 ARCQ7LC44 396 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 ANKS1BQ7Z6G8 1248 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 TXNDC5Q8NBS9 432 aaKnown RBP12.33□□□□□ -0.44
RFC4-208ENST00000447345 OR8K1Q8NGG5 319 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 FAM172AQ8WUF8 416 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 ACDQ96AP0 544 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 PGAP3Q96FM1 320 aaPredicted RBP12.33□□□□□ -0.44
RFC4-208ENST00000447345 RPRD1AQ96P16 312 aaPredicted RBP12.33□□□□□ -0.44
RFC4-208ENST00000447345 DNAJC7Q99615 494 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 CIPCQ9C0C6 399 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 DEF6Q9H4E7 631 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 ABCB8Q9NUT2 735 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 ZNHIT6Q9NWK9 470 aaKnown RBP12.33□□□□□ -0.44
RFC4-208ENST00000447345 ARHGEF38Q9NXL2 777 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 SLC8A2Q9UPR5 921 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 PAXBP1Q9Y5B6 917 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 R4GN57 208 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 CEP192Q8TEP8 1941 aa12.33□□□□□ -0.44
RFC4-208ENST00000447345 CHURC1-FNTBB4DL54 471 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 SGK1O00141 431 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 LUC7L3O95232 432 aaKnown RBP12.32□□□□□ -0.44
RFC4-208ENST00000447345 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
RFC4-208ENST00000447345 GZMAP12544 262 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 HLA-FP30511 346 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 CD70P32970 193 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 PTPN9P43378 593 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 KIR2DL1P43626 348 aaPredicted RBP12.32□□□□□ -0.44
RFC4-208ENST00000447345 HDAC4P56524 1084 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 MRPS21P82921 87 aaKnown RBP12.32□□□□□ -0.44
RFC4-208ENST00000447345 OGDHQ02218 1023 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 NHLH1Q02575 133 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 MAMLD1Q13495 774 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 AUHQ13825 339 aaKnown RBP12.32□□□□□ -0.44
RFC4-208ENST00000447345 DMC1Q14565 340 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 TSR1Q2NL82 804 aaKnown RBP12.32□□□□□ -0.44
RFC4-208ENST00000447345 RABGAP1LQ5R372 815 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 PPP1R15BQ5SWA1 713 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 FBXL22Q6P050 247 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 CHST9Q7L1S5 443 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 BNIPLQ7Z465 357 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 C14orf80Q86SX3 495 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 CCDC117Q8IWD4 279 aaPredicted RBP12.32□□□□□ -0.44
RFC4-208ENST00000447345 IL17RCQ8NAC3 791 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 CCDC26Q8TAB7 109 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 SORCS1Q8WY21 1168 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 IGSF8Q969P0 613 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 VCPIP1Q96JH7 1222 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 ACOX2Q99424 681 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 PHOX2BQ99453 314 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 PRMT1Q99873 361 aaKnown RBP12.32□□□□□ -0.44
RFC4-208ENST00000447345 TRIM7Q9C029 511 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 PARVAQ9NVD7 372 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 CACNA2D2Q9NY47 1150 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 GGA2Q9UJY4 613 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 FBXO10Q9UK96 956 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 FBXO4Q9UKT5 387 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 HCN2Q9UL51 889 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 MMP17Q9ULZ9 603 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 SLC27A6Q9Y2P4 619 aa12.32□□□□□ -0.44
RFC4-208ENST00000447345 VPS13AQ96RL7 3174 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 AKR1B15C9JRZ8 316 aaPredicted RBP12.31□□□□□ -0.44
RFC4-208ENST00000447345 H0Y626 953 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 K7ESF4 209 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 PABPC1P11940 636 aaKnown RBP12.31□□□□□ -0.44
RFC4-208ENST00000447345 TDGF1P13385 188 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 PSMA2P25787 234 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 HNRNPH3P31942 346 aaKnown RBP12.31□□□□□ -0.44
RFC4-208ENST00000447345 FNTBP49356 437 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 ZNF143P52747 638 aaPredicted RBP12.31□□□□□ -0.44
RFC4-208ENST00000447345 LMAN2Q12907 356 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 TBX2Q13207 712 aaPredicted RBP12.31□□□□□ -0.44
RFC4-208ENST00000447345 FUT11Q495W5 492 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 FSCBQ5H9T9 825 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 CCDC122Q5T0U0 273 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 TMEM215Q68D42 235 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 PLEKHA7Q6IQ23 1121 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 SCYL2Q6P3W7 929 aa12.31□□□□□ -0.44
RFC4-208ENST00000447345 SYT13Q7L8C5 426 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms