RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ERGIC2Q96RQ1 377 aa15.29■□□□□ 0.04
USE1-202ENST00000445667 BPIFA3Q9BQP9 254 aa15.29■□□□□ 0.04
USE1-202ENST00000445667 FUCA2Q9BTY2 467 aa15.29■□□□□ 0.04
USE1-202ENST00000445667 ADAM33Q9BZ11 813 aa15.29■□□□□ 0.04
USE1-202ENST00000445667 IRX2Q9BZI1 471 aaPredicted RBP15.29■□□□□ 0.04
USE1-202ENST00000445667 SLC12A6Q9UHW9 1150 aa15.29■□□□□ 0.04
USE1-202ENST00000445667 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 SMTNL1A8MU46 457 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 GOLGA8SH3BPF8 625 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 M0QYT0 321 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 NPC1O15118 1278 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 LSM8O95777 96 aaKnown RBP15.28■□□□□ 0.04
USE1-202ENST00000445667 HLA-EP13747 358 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 ABCB4P21439 1286 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 PRKCHP24723 683 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 CCR1P32246 355 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 MPLP40238 635 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 MATKP42679 507 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 DHPSP49366 369 aaPredicted RBP15.28■□□□□ 0.04
USE1-202ENST00000445667 ZNF165P49910 485 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 FMO1Q01740 532 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 CDR2Q01850 454 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 CREB5Q02930 508 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 LMAN2Q12907 356 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 BYSLQ13895 437 aaKnown RBP15.28■□□□□ 0.04
USE1-202ENST00000445667 STARD3Q14849 445 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 FUT11Q495W5 492 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 FSCBQ5H9T9 825 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 FAM102AQ5T9C2 384 aaPredicted RBP15.28■□□□□ 0.04
USE1-202ENST00000445667 MBLAC2Q68D91 279 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 PRR23CQ6ZRP0 262 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 MMS22LQ6ZRQ5 1243 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 PHLDB2Q86SQ0 1253 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 C11orf74Q86VG3 221 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 ZNF677Q86XU0 584 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 TMEFF1Q8IYR6 380 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 AHI1Q8N157 1196 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 DEFB119Q8N690 84 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 FIBINQ8TAL6 211 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 SPACA7Q96KW9 195 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 MRGPRX1Q96LB2 322 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.28■□□□□ 0.04
USE1-202ENST00000445667 DAAM1Q9Y4D1 1078 aa15.28■□□□□ 0.04
USE1-202ENST00000445667 SDK1Q7Z5N4 2213 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 DMXL1Q9Y485 3027 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 SYCE3A1L190 88 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 TYW5A2RUC4 315 aaKnown RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 GDF9O60383 454 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 SYNCRIPO60506 623 aaKnown RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 CYP1A1P04798 512 aaPredicted RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 EPHX1P07099 455 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 ZNF806P0C7X5 589 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 SLC2A3P11169 496 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 POLR2EP19388 210 aaKnown RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 SULT1E1P49888 294 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 LMNB2Q03252 620 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 KLHL40Q2TBA0 621 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 FNDC3BQ53EP0 1204 aaKnown RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 PLA2G2CQ5R387 149 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 OTUD1Q5VV17 481 aaPredicted RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 KIAA1324Q6UXG2 1013 aaKnown RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 SERPINA13PQ6UXR4 307 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 ARMCX6Q7L4S7 300 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 CIR1Q86X95 450 aaPredicted RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 ZNF366Q8N895 744 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 SLC30A5Q8TAD4 765 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 LMLNQ96KR4 655 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 PCDHB18PQ96TA0 734 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 NPY6RQ99463 290 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 PRMT1Q99873 361 aaKnown RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 MKRN2Q9H000 416 aaKnown RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 CD93Q9NPY3 652 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 INTS6Q9UL03 887 aaKnown RBP15.27■□□□□ 0.04
USE1-202ENST00000445667 CYP8B1Q9UNU6 501 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 PLA2G4CQ9UP65 541 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 PCDHGA5Q9Y5G8 931 aa15.27■□□□□ 0.04
USE1-202ENST00000445667 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.26■□□□□ 0.03
USE1-202ENST00000445667 BCLAF3A2AJT9 711 aaKnown RBP15.26■□□□□ 0.03
USE1-202ENST00000445667 PRR5-ARHGAP8B1AHC4 643 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 F5H5T6 163 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 H0Y626 953 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 LUC7L3O95232 432 aaKnown RBP15.26■□□□□ 0.03
USE1-202ENST00000445667 CAVIN2O95810 425 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 FLT3P36888 993 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 SCNN1AP37088 669 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 GGCXP38435 758 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 NUMBP49757 651 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 ARHGAP8P85298 464 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 CDH18Q13634 790 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 IQCB1Q15051 598 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 PTPRNQ16849 979 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 LPCAT2Q7L5N7 544 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 CCDC117Q8IWD4 279 aaPredicted RBP15.26■□□□□ 0.03
USE1-202ENST00000445667 MSANTD4Q8NCY6 345 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 TBCBQ99426 244 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 SIK2Q9H0K1 926 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 TMEM245Q9H330 911 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 RTN4Q9NQC3 1192 aaKnown RBP15.26■□□□□ 0.03
USE1-202ENST00000445667 RXFP3Q9NSD7 469 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 PIGVQ9NUD9 493 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms