RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 CD99L2Q8TCZ2 262 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 SENP1Q9P0U3 644 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 ZNF236Q9UL36 1845 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 A0A0U1RQF3 1178 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 SOAT2O75908 522 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 IGHA2P01877 340 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 TPH1P17752 444 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 BGNP21810 368 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 SLC26A11Q86WA9 606 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 OR52K1Q8NGK4 314 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 KCTD13Q8WZ19 329 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 OLFM3Q96PB7 478 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 SLC2A13Q96QE2 648 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 CHST12Q9NRB3 414 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 STK38LQ9Y2H1 464 aa17.3■□□□□ 0.36
LAPTM4B-201ENST00000445593 GOLGA8TH3BQL2 631 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 DFFAO00273 331 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 COPEO14579 308 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 ATP9BO43861 1147 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 DGKIO75912 1065 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 STK10O94804 968 aaKnown RBP17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 WASHC5Q12768 1159 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 PDK4Q16654 411 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 SLC39A12Q504Y0 691 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 OTOAQ7RTW8 1153 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 BANPQ8N9N5 519 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 DNAAF3Q8N9W5 541 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 SYBUQ9NX95 663 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 A0A0G2JND7 137 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 IRF5Q13568 498 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 INTS6LQ5JSJ4 861 aaKnown RBP17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 ZNF449Q6P9G9 518 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 ARMC2Q8NEN0 867 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 RSPH1Q8WYR4 309 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 ERP27Q96DN0 273 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 STAMBPL1Q96FJ0 436 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 EBNA1BP2Q99848 306 aaKnown RBP17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 DHRS4Q9BTZ2 278 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 ZNF395Q9H8N7 513 aaPredicted RBP17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 ECT2Q9H8V3 914 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 CYLDQ9NQC7 956 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 CNGB3Q9NQW8 809 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 DNAJB4Q9UDY4 337 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 GGA2Q9UJY4 613 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 TRPM7Q96QT4 1865 aa17.29■□□□□ 0.36
LAPTM4B-201ENST00000445593 SHROOM3Q8TF72 1996 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 HHLA1C9JL84 531 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 LRIG2O94898 1065 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 OAS1P00973 400 aaKnown RBP17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 PDK1Q15118 436 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 DDR2Q16832 855 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 ARHGAP36Q6ZRI8 547 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 DDHD2O94830 711 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 ERVK-10P10266 1014 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 SCNN1AP37088 669 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 KCNJ2P63252 427 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 KDM4CQ9H3R0 1056 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 MARCOQ9UEW3 520 aaPredicted RBP17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 PSAT1Q9Y617 370 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 SMAPO00193 183 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 HNRNPH1P31943 449 aaKnown RBP17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 GRK4P32298 578 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 GATMP50440 423 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 ACLYP53396 1101 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 SP3Q02447 781 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 XRCC4Q13426 336 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 TUSC3Q13454 348 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 SPATA2LQ8IUW3 424 aaPredicted RBP17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 DQX1Q8TE96 717 aaKnown RBP17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 NT5C3BQ969T7 300 aa17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 SRPK1Q96SB4 655 aaKnown RBP17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 DMAP1Q9NPF5 467 aaPredicted RBP17.28■□□□□ 0.36
LAPTM4B-201ENST00000445593 PPP1R12AO14974 1030 aaPredicted RBP17.27■□□□□ 0.36
LAPTM4B-201ENST00000445593 ZBTB24O43167 697 aaPredicted RBP17.27■□□□□ 0.36
LAPTM4B-201ENST00000445593 KITP10721 976 aa17.27■□□□□ 0.36
LAPTM4B-201ENST00000445593 DPYSQ14117 519 aa17.27■□□□□ 0.36
LAPTM4B-201ENST00000445593 CD300LGQ6UXG3 332 aa17.27■□□□□ 0.36
LAPTM4B-201ENST00000445593 GSDMBQ8TAX9 411 aa17.27■□□□□ 0.36
LAPTM4B-201ENST00000445593 ACTR5Q9H9F9 607 aaPredicted RBP17.27■□□□□ 0.36
LAPTM4B-201ENST00000445593 FBXW11Q9UKB1 542 aa17.27■□□□□ 0.36
LAPTM4B-201ENST00000445593 ATXN2Q99700 1313 aaKnown RBP17.27■□□□□ 0.36
LAPTM4B-201ENST00000445593 NT5C1B-RDH14C9J2C7 533 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 DCLK1O15075 740 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 KRT37O76014 449 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 FBXO21O94952 628 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZWINTO95229 277 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 JCHAINP01591 159 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 PGGT1BP53609 377 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 SLC5A3P53794 718 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 TSPY1Q01534 308 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 YWHAHQ04917 246 aaPredicted RBP17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZBTB17Q13105 803 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 SEMA5AQ13591 1074 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 ARL13BQ3SXY8 428 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 C16orf46Q6P387 395 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 ZCCHC23Q6ZST2 131 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 BHLHA9Q7RTU4 235 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 RTN4RL1Q86UN2 441 aaPredicted RBP17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 NDUFAF2Q8N183 169 aa17.27■□□□□ 0.35
LAPTM4B-201ENST00000445593 TTC9BQ8N6N2 239 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms