RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 EIF4EBP2Q13542 120 aaPredicted RBP17.83■□□□□ 0.44
LIME1-202ENST00000444951 PPP2R5DQ14738 602 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 ACAP1Q15027 740 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 ZFYVE27Q5T4F4 411 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 TSSK4Q6SA08 328 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 ZNF662Q6ZS27 426 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 BNIPLQ7Z465 357 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 YAF2Q8IY57 180 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 RNF10Q8N5U6 811 aaKnown RBP17.83■□□□□ 0.44
LIME1-202ENST00000444951 ATP6V0D2Q8N8Y2 350 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 KIAA1524Q8TCG1 905 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 BPIFB1Q8TDL5 484 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 DNASE1L2Q92874 299 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 PEBP4Q96S96 227 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 SIK2Q9H0K1 926 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 BRD9Q9H8M2 597 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 TRPV4Q9HBA0 871 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 ANLNQ9NQW6 1124 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 USP18Q9UMW8 372 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 NDRG2Q9UN36 371 aaKnown RBP17.83■□□□□ 0.44
LIME1-202ENST00000444951 SNX10Q9Y5X0 201 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 WNT6Q9Y6F9 365 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 CACNA1AO00555 2505 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 GOLGA6L7A0A1B0GV03 622 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 TRDMT1O14717 391 aaKnown RBP17.82■□□□□ 0.44
LIME1-202ENST00000444951 PAGE1O75459 146 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 FTCDO95954 541 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 GDI1P31150 447 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 MAN1A1P33908 653 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 SLC11A2P49281 568 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 TAS2R40P59535 323 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 HADHQ16836 314 aaKnown RBP17.82■□□□□ 0.44
LIME1-202ENST00000444951 SMTNL2Q2TAL5 461 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 ARL13BQ3SXY8 428 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 BRMS1LQ5PSV4 323 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 C11orf63Q6NUN7 778 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 ZC3H14Q6PJT7 736 aaKnown RBP17.82■□□□□ 0.44
LIME1-202ENST00000444951 ZNF852Q6ZMS4 543 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 SLFN11Q7Z7L1 901 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 BBS7Q8IWZ6 715 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 KIAA2013Q8IYS2 634 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 HSPH1Q92598 858 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 ZFYVE19Q96K21 471 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 CALR3Q96L12 384 aaKnown RBP17.82■□□□□ 0.44
LIME1-202ENST00000444951 TRMT61BQ9BVS5 477 aaKnown RBP17.82■□□□□ 0.44
LIME1-202ENST00000444951 MAGEB5Q9BZ81 275 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 DCLK3Q9C098 648 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 FBXO4Q9UKT5 387 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 AGO1Q9UL18 857 aaKnown RBP17.82■□□□□ 0.44
LIME1-202ENST00000444951 ZKSCAN5Q9Y2L8 839 aa17.82■□□□□ 0.44
LIME1-202ENST00000444951 E2F8A0AVK6 867 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 KCNU1A8MYU2 1149 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 ARNTLO00327 626 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 GREM1O60565 184 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 TSPAN3O60637 253 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 IL1R2P27930 398 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 ADRA1BP35368 520 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 PCK1P35558 622 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 MTAPQ13126 283 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 ZNF528Q3MIS6 628 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 KCNT1Q5JUK3 1230 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 RAP1GAP2Q684P5 730 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 TXNRD3NBQ6F5E7 133 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 HTR3DQ70Z44 454 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 PEX26Q7Z412 305 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 SYCE1Q8N0S2 351 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 LRRC57Q8N9N7 239 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 RMDN1Q96DB5 314 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 BTN2A3PQ96KV6 586 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 ALS2CR12Q96Q35 445 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 NCAPGQ9BPX3 1015 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 SNRNP25Q9BV90 132 aaKnown RBP17.81■□□□□ 0.44
LIME1-202ENST00000444951 LINC00597Q9H2U6 94 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 KLHL11Q9NVR0 708 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 THG1LQ9NWX6 298 aaKnown RBP17.81■□□□□ 0.44
LIME1-202ENST00000444951 ARHGEF38Q9NXL2 777 aa17.81■□□□□ 0.44
LIME1-202ENST00000444951 GOLGA6L9A6NEM1 432 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 I6L893 689 aaPredicted RBP17.8■□□□□ 0.44
LIME1-202ENST00000444951 ACSL4O60488 711 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 PSMC3P17980 439 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 SLC1A1P43005 524 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 MAGEA9P43362 315 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 RPS9P46781 194 aaKnown RBP17.8■□□□□ 0.44
LIME1-202ENST00000444951 IFNAR2P48551 515 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 DNA2P51530 1060 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 SLC25A11Q02978 314 aaKnown RBP17.8■□□□□ 0.44
LIME1-202ENST00000444951 ATP13A4Q4VNC1 1196 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 EFHC2Q5JST6 749 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 ZNF569Q5MCW4 686 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 ERMARDQ5T6L9 678 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 TRIM68Q6AZZ1 485 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 RFWD3Q6PCD5 774 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 CHSY1Q86X52 802 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 MFSD6LQ8IWD5 586 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 PYROXD2Q8N2H3 581 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 NELL1Q92832 810 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 E2F7Q96AV8 911 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 DHX35Q9H5Z1 703 aaKnown RBP17.8■□□□□ 0.44
LIME1-202ENST00000444951 PRMT8Q9NR22 394 aaPredicted RBP17.8■□□□□ 0.44
LIME1-202ENST00000444951 DUS2Q9NX74 493 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms