RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 GJA1P17302 382 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 ERCC2P18074 760 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 TACR2P21452 398 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 AMPD1P23109 780 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 FSHRP23945 695 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 TERF1P54274 439 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 NTHL1P78549 312 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
MCF2L-217ENST00000441756 OTUD4Q01804 1114 aaKnown RBP16.4■□□□□ 0.22
MCF2L-217ENST00000441756 AUHQ13825 339 aaKnown RBP16.4■□□□□ 0.22
MCF2L-217ENST00000441756 PAFAH1B3Q15102 231 aaKnown RBP16.4■□□□□ 0.22
MCF2L-217ENST00000441756 NOMO1Q15155 1222 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 SLC5A9Q2M3M2 681 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 ADGRF1Q5T601 910 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 FAM72AQ5TYM5 149 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 RAP1GAP2Q684P5 730 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 FAM72DQ6L9T8 149 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 CCDC137Q6PK04 289 aaKnown RBP16.4■□□□□ 0.22
MCF2L-217ENST00000441756 SYDE1Q6ZW31 735 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-217ENST00000441756 FAM72BQ86X60 149 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 DENND1CQ8IV53 801 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 CCDC105Q8IYK2 499 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 PLD5Q8N7P1 536 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 ACTL9Q8TC94 416 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 RIPOR3Q96MK2 946 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 SLC22A12Q96S37 553 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 FERMT1Q9BQL6 677 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 ZYG11BQ9C0D3 744 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 DDX47Q9H0S4 455 aaKnown RBP16.4■□□□□ 0.22
MCF2L-217ENST00000441756 GKN1Q9NS71 199 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 MTCH2Q9Y6C9 303 aa16.4■□□□□ 0.22
MCF2L-217ENST00000441756 HELZP42694 1942 aaKnown RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 IGLV3-10A0A075B6K4 115 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 E2F8A0AVK6 867 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 DCLK1O15075 740 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 LIASO43766 372 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 MOSPD3O75425 235 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 TCF3P15923 654 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 RHOQP17081 205 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 CEBPBP17676 345 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 WEE1P30291 646 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 COILP38432 576 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 VCPP55072 806 aaKnown RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 EIF3EP60228 445 aaKnown RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 DR1Q01658 176 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 ADCY2Q08462 1091 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 XRCC4Q13426 336 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 BYSLQ13895 437 aaKnown RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 GRIN2CQ14957 1233 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 STXBP5Q5T5C0 1151 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 NCBP2-AS2Q69YL0 99 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 HTR3DQ70Z44 454 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 CDKL3Q8IVW4 592 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 KIAA1958Q8N8K9 716 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 NOA1Q8NC60 698 aaKnown RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 C1orf54Q8WWF1 131 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 RUBCNQ92622 972 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 NKD2Q969F2 451 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 CCDC114Q96M63 670 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 RPRD1AQ96P16 312 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 PRMT1Q99873 361 aaKnown RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 MAGEB5Q9BZ81 275 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 BRD8Q9H0E9 1235 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 TDP1Q9NUW8 608 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 CFAP97Q9P2B7 532 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 PCYOX1Q9UHG3 505 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 XPO7Q9UIA9 1087 aaKnown RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 STOML2Q9UJZ1 356 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 VANGL2Q9ULK5 521 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 R3HDM2Q9Y2K5 976 aaKnown RBP16.39■□□□□ 0.21
MCF2L-217ENST00000441756 HEY1Q9Y5J3 304 aa16.39■□□□□ 0.21
MCF2L-217ENST00000441756 CFAP69A5D8W1 941 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 FAM187AA6NFU0 413 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 WASH4PA8MWX3 477 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 HACD1B0YJ81 288 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 LEFTY2O00292 366 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 PPP1R12AO14974 1030 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-217ENST00000441756 LINC01565O15544 149 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 ECEL1O95672 775 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 TUBBP07437 444 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 MX2P20592 715 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 IGFBP4P22692 258 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 CHKAP35790 457 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 GGCXP38435 758 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 MTHFRP42898 656 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 PDK1Q15118 436 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 ATAT1Q5SQI0 421 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 C1orf228Q6PIY5 440 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 Q6ZNB5 142 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 LGI2Q8N0V4 545 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 RTL3Q8N8U3 475 aaKnown RBP16.38■□□□□ 0.21
MCF2L-217ENST00000441756 ATL2Q8NHH9 583 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 SLC35B2Q8TB61 432 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 SH3RF2Q8TEC5 729 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 ING5Q8WYH8 240 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 ATG4AQ8WYN0 398 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 SLCO2A1Q92959 643 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 RAB17Q9H0T7 212 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 ADAM7Q9H2U9 754 aa16.38■□□□□ 0.21
MCF2L-217ENST00000441756 CLDND1Q9NY35 253 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms