RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 FGD2Q7Z6J4 655 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 KIF12Q96FN5 646 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 GPRC5CQ9NQ84 441 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 WBP11Q9Y2W2 641 aaKnown RBP14.98□□□□□ -0.01
PCNX1-202ENST00000439984 PMPCBO75439 489 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 TIPRLO75663 272 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 PIK3R1P27986 724 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 HPCAP84074 193 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 C4orf22Q6V702 233 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 NLGN1Q8N2Q7 840 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 TIPINQ9BVW5 301 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 FRMD8P1Q9BZ68 369 aaPredicted RBP14.98□□□□□ -0.01
PCNX1-202ENST00000439984 SORCS3Q9UPU3 1222 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 C5orf60A6NFR6 353 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 PGK2P07205 417 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 PLK1P53350 603 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 DENND5AQ6IQ26 1287 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 C16orf62Q7Z3J2 963 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 DQX1Q8TE96 717 aaKnown RBP14.98□□□□□ -0.01
PCNX1-202ENST00000439984 DMRTB1Q96MA1 342 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 KRT84Q9NSB2 600 aa14.98□□□□□ -0.01
PCNX1-202ENST00000439984 PDGFRBP09619 1106 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 HSD17B4P51659 736 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 AP3M2P53677 418 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 FSTL1Q12841 308 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 ACVR2BQ13705 512 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 TMC7Q7Z402 723 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 PNMA5Q96PV4 448 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 SPON2Q9BUD6 331 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 CDH22Q9UJ99 828 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 USP18Q9UMW8 372 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 SLC8A2Q9UPR5 921 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 GMEB1Q9Y692 573 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 PTGS2P35354 604 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 NADK2Q4G0N4 442 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 SLC35C1Q96A29 364 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 FBXO40Q9UH90 709 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 PRPF4O43172 522 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCNX1-202ENST00000439984 MGAT5Q09328 741 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 SH3D19Q5HYK7 790 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 SCN4BQ8IWT1 228 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 TBATAQ96M53 351 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 QTRT2Q9H974 415 aaKnown RBP14.97□□□□□ -0.01
PCNX1-202ENST00000439984 LRRC40Q9H9A6 602 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 PNPOQ9NVS9 261 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 TCHHQ07283 1943 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 VAPBO95292 243 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 GARTP22102 1010 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 NCF4Q15080 339 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 DNAJC14Q6Y2X3 702 aaPredicted RBP14.97□□□□□ -0.01
PCNX1-202ENST00000439984 CHSY1Q86X52 802 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 ITFG1Q8TB96 612 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 FAM193BQ96PV7 902 aaPredicted RBP14.97□□□□□ -0.01
PCNX1-202ENST00000439984 HSD3B7Q9H2F3 369 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 ANAPC2Q9UJX6 822 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 ZNF222Q9UK12 451 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 TBX3O15119 743 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 SIN3BO75182 1162 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 MGAT1P26572 445 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 PDCD4Q53EL6 469 aaKnown RBP14.97□□□□□ -0.01
PCNX1-202ENST00000439984 DDI2Q5TDH0 399 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 CATSPER4Q7RTX7 472 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 VPS33AQ96AX1 596 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 PABPC5Q96DU9 382 aaKnown RBP14.97□□□□□ -0.01
PCNX1-202ENST00000439984 TINF2Q9BSI4 451 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 UBP1Q9NZI7 540 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 VTI1BQ9UEU0 232 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 DUSP12Q9UNI6 340 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 TRIM38O00635 465 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 ASLP04424 464 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 RASA1P20936 1047 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 CBWD6Q4V339 395 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 DCAF6Q58WW2 860 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 CBWD3Q5JTY5 395 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 CBWD5Q5RIA9 395 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 ZNF276Q8N554 614 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 ALG3Q92685 438 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 QKIQ96PU8 341 aaKnown RBP eCLIP14.97□□□□□ -0.012e-8■■■□□ 18.9
PCNX1-202ENST00000439984 STK32BQ9NY57 414 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 SNX9Q9Y5X1 595 aa14.97□□□□□ -0.01
PCNX1-202ENST00000439984 RGSL1A5PLK6 1076 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 SLC16A1P53985 500 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 CYP4F2P78329 520 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 CYP4F3Q08477 520 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 KYAT3Q6YP21 454 aaKnown RBP14.96□□□□□ -0.01
PCNX1-202ENST00000439984 RNF149Q8NC42 400 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 FBXO30Q8TB52 745 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 ZFAND2BQ8WV99 257 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 YME1L1Q96TA2 773 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 ZNF624Q9P2J8 865 aaPredicted RBP14.96□□□□□ -0.01
PCNX1-202ENST00000439984 RAB26Q9ULW5 256 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 RNF112Q9ULX5 631 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 FER1L4A9Z1Z3 1794 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 TYW5A2RUC4 315 aaKnown RBP14.96□□□□□ -0.01
PCNX1-202ENST00000439984 FAM86B1E9PN63 330 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 BOLA2-SMG1P6H3BVE0 249 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 CCRL2O00421 344 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.96□□□□□ -0.01
PCNX1-202ENST00000439984 SPDYE7PQ495Y7 208 aa14.96□□□□□ -0.01
PCNX1-202ENST00000439984 WDR70Q9NW82 654 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms