RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 GPR161Q8N6U8 529 aaKnown RBP24.88■■□□□ 1.57
CPNE1-217ENST00000439669 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.88■■□□□ 1.57
CPNE1-217ENST00000439669 RLN3Q8WXF3 142 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 SEPT11Q9NVA2 429 aaKnown RBP24.88■■□□□ 1.57
CPNE1-217ENST00000439669 RRN3Q9NYV6 651 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 GVINP1Q7Z2Y8 2422 aa24.88■■□□□ 1.57
CPNE1-217ENST00000439669 SERPINC1P01008 464 aa24.87■■□□□ 1.57
CPNE1-217ENST00000439669 CD70P32970 193 aa24.87■■□□□ 1.57
CPNE1-217ENST00000439669 RNF43Q68DV7 783 aa24.87■■□□□ 1.57
CPNE1-217ENST00000439669 LUZP1Q86V48 1076 aa24.87■■□□□ 1.57
CPNE1-217ENST00000439669 OLIG1Q8TAK6 271 aa24.87■■□□□ 1.57
CPNE1-217ENST00000439669 LOXL4Q96JB6 756 aa24.87■■□□□ 1.57
CPNE1-217ENST00000439669 ZC3H10Q96K80 434 aaKnown RBP24.87■■□□□ 1.57
CPNE1-217ENST00000439669 NPY6RQ99463 290 aa24.87■■□□□ 1.57
CPNE1-217ENST00000439669 C11orf70Q9BRQ4 267 aa24.87■■□□□ 1.57
CPNE1-217ENST00000439669 DUSP15Q9H1R2 295 aaPredicted RBP24.87■■□□□ 1.57
CPNE1-217ENST00000439669 SPAG17Q6Q759 2223 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 RHOBTB1O94844 696 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 BCKDHBP21953 392 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 SKOR2Q2VWA4 1001 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-217ENST00000439669 ZSCAN23Q3MJ62 389 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 OTUD1Q5VV17 481 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-217ENST00000439669 MBLAC2Q68D91 279 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 SERPINA13PQ6UXR4 307 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 SND1Q7KZF4 910 aaKnown RBP eCLIP24.86■■□□□ 1.57
CPNE1-217ENST00000439669 ADIPOR2Q86V24 386 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 SLC30A5Q8TAD4 765 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 FIBINQ8TAL6 211 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 CYB5D2Q8WUJ1 264 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 PARD6AQ9NPB6 346 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 METTL5Q9NRN9 209 aaKnown RBP24.86■■□□□ 1.57
CPNE1-217ENST00000439669 CALCOCO1Q9P1Z2 691 aa24.86■■□□□ 1.57
CPNE1-217ENST00000439669 A0A1B0GTH6 734 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 H0Y626 953 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 SYNCRIPO60506 623 aaKnown RBP24.85■■□□□ 1.57
CPNE1-217ENST00000439669 LUC7L3O95232 432 aaKnown RBP24.85■■□□□ 1.57
CPNE1-217ENST00000439669 CCDC172P0C7W6 258 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 FERP16591 822 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 POLR2EP19388 210 aaKnown RBP24.85■■□□□ 1.57
CPNE1-217ENST00000439669 NDUFV2P19404 249 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 TFE3P19532 575 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-217ENST00000439669 MMP8P22894 467 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 FLT3P36888 993 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 P2RY2P41231 377 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 NSFP46459 744 aaKnown RBP24.85■■□□□ 1.57
CPNE1-217ENST00000439669 DEUP1Q05D60 604 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 LMAN2Q12907 356 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 MTA1Q13330 715 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 BYSLQ13895 437 aaKnown RBP24.85■■□□□ 1.57
CPNE1-217ENST00000439669 FNDC3BQ53EP0 1204 aaKnown RBP24.85■■□□□ 1.57
CPNE1-217ENST00000439669 PHLDB2Q86SQ0 1253 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 NAP1L5Q96NT1 182 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-217ENST00000439669 PCDHB18PQ96TA0 734 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 TBCBQ99426 244 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 ARRDC1-AS1Q9H2J1 176 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 CD248Q9HCU0 757 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 PIGVQ9NUD9 493 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 PLA2G4CQ9UP65 541 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 DMDP11532 3685 aa24.85■■□□□ 1.57
CPNE1-217ENST00000439669 SDK1Q7Z5N4 2213 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 MAP3K13O43283 966 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 LRP3O75074 770 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 EPN2O95208 641 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 PRKCHP24723 683 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 ENPP2Q13822 863 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 SLC25A52Q3SY17 297 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 FUT11Q495W5 492 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 RABGAP1LQ5R372 815 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 KIAA1324Q6UXG2 1013 aaKnown RBP24.84■■□□□ 1.57
CPNE1-217ENST00000439669 KIAA0907Q7Z7F0 614 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-217ENST00000439669 PRMT1Q99873 361 aaKnown RBP24.84■■□□□ 1.57
CPNE1-217ENST00000439669 ADAM33Q9BZ11 813 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 SLC6A17Q9H1V8 727 aa24.84■■□□□ 1.57
CPNE1-217ENST00000439669 A0A1W2PQC6 194 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 GOLGA6L19H0YKK7 550 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 F9P00740 461 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 ATP5BP06576 529 aaKnown RBP24.83■■□□□ 1.57
CPNE1-217ENST00000439669 EPHX1P07099 455 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 UNGP13051 313 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-217ENST00000439669 TGM1P22735 817 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 GGCXP38435 758 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 CLEC16AQ2KHT3 1053 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 MAP7D1Q3KQU3 841 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 BRMS1LQ5PSV4 323 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 PMS2CLQ68D20 193 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 CIR1Q86X95 450 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-217ENST00000439669 FRMD1Q8N878 549 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 BAP1Q92560 729 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 RPRD1AQ96P16 312 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-217ENST00000439669 AGPAT1Q99943 283 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 WDCPQ9H6R7 721 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 SEMA4GQ9NTN9 838 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 TMEM59LQ9UK28 342 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 PAXBP1Q9Y5B6 917 aa24.83■■□□□ 1.57
CPNE1-217ENST00000439669 PAGE1O75459 146 aa24.82■■□□□ 1.56
CPNE1-217ENST00000439669 CAVIN2O95810 425 aa24.82■■□□□ 1.56
CPNE1-217ENST00000439669 DLDP09622 509 aaKnown RBP24.82■■□□□ 1.56
CPNE1-217ENST00000439669 HLA-EP13747 358 aa24.82■■□□□ 1.56
CPNE1-217ENST00000439669 CXCR3P49682 368 aa24.82■■□□□ 1.56
CPNE1-217ENST00000439669 CENPCQ03188 943 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms