RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 FNDC3BQ53EP0 1204 aaKnown RBP14.35□□□□□ -0.11
PRAME-209ENST00000439106 FSCBQ5H9T9 825 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 MS4A13Q5J8X5 152 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 STPG1Q5TH74 334 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 LYSMD4Q5XG99 296 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 MBLAC2Q68D91 279 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 SASS6Q6UVJ0 657 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 NOP9Q86U38 636 aaKnown RBP14.35□□□□□ -0.11
PRAME-209ENST00000439106 CHSY1Q86X52 802 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 SLC41A1Q8IVJ1 513 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 LGI2Q8N0V4 545 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRAME-209ENST00000439106 HJURPQ8NCD3 748 aaPredicted RBP14.35□□□□□ -0.11
PRAME-209ENST00000439106 SLC2A13Q96QE2 648 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 ADAM33Q9BZ11 813 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 GANQ9H2C0 597 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 LHX5Q9H2C1 402 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 SYNCQ9H7C4 482 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 DDIT4Q9NX09 232 aa14.35□□□□□ -0.11
PRAME-209ENST00000439106 TPRP12270 2363 aaKnown RBP14.35□□□□□ -0.11
PRAME-209ENST00000439106 PCNX2A6NKB5 2137 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 GOLGA6L22H0YM25 854 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 ZBTB24O43167 697 aaPredicted RBP14.34□□□□□ -0.11
PRAME-209ENST00000439106 AP5Z1O43299 807 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 SYNCRIPO60506 623 aaKnown RBP14.34□□□□□ -0.11
PRAME-209ENST00000439106 DAB1O75553 588 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 TFE3P19532 575 aaPredicted RBP14.34□□□□□ -0.11
PRAME-209ENST00000439106 TACR2P21452 398 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 SDHBP21912 280 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 IRX4P78413 519 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 BYSLQ13895 437 aaKnown RBP14.34□□□□□ -0.11
PRAME-209ENST00000439106 STX1AQ16623 288 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 TRIM61Q5EBN2 209 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 CT47A1Q5JQC4 288 aaPredicted RBP14.34□□□□□ -0.11
PRAME-209ENST00000439106 OTUD1Q5VV17 481 aaPredicted RBP14.34□□□□□ -0.11
PRAME-209ENST00000439106 RNF43Q68DV7 783 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 BEND5Q7L4P6 421 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 KIAA0907Q7Z7F0 614 aaPredicted RBP14.34□□□□□ -0.11
PRAME-209ENST00000439106 TMPRSS6Q8IU80 811 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 AHI1Q8N157 1196 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 WFIKKN2Q8TEU8 576 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 SLC20A1Q8WUM9 679 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 AZIN2Q96A70 460 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 HSPA12BQ96MM6 686 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 NOX5Q96PH1 765 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 PDCL3Q9H2J4 239 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 PRDM16Q9HAZ2 1276 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 NLRC4Q9NPP4 1024 aa14.34□□□□□ -0.11
PRAME-209ENST00000439106 FAM207AQ9NSI2 230 aaPredicted RBP14.34□□□□□ -0.11
PRAME-209ENST00000439106 INTS6Q9UL03 887 aaKnown RBP14.34□□□□□ -0.11
PRAME-209ENST00000439106 TYW5A2RUC4 315 aaKnown RBP14.33□□□□□ -0.12
PRAME-209ENST00000439106 C4orf47A7E2U8 309 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 F8VZ95 297 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 KHNYNO15037 678 aaKnown RBP14.33□□□□□ -0.12
PRAME-209ENST00000439106 FOXD2O60548 495 aaPredicted RBP14.33□□□□□ -0.12
PRAME-209ENST00000439106 HSF2BPO75031 334 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 ZNF217O75362 1048 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 GFPT2O94808 682 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 LUC7L3O95232 432 aaKnown RBP14.33□□□□□ -0.12
PRAME-209ENST00000439106 MMEP08473 750 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 CTSOP43234 321 aaPredicted RBP14.33□□□□□ -0.12
PRAME-209ENST00000439106 IRAK1P51617 712 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 RNASE9P60153 205 aaKnown RBP14.33□□□□□ -0.12
PRAME-209ENST00000439106 CDK17Q00537 523 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 SLC6A3Q01959 620 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 CENPCQ03188 943 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 ZNF33AQ06730 810 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 NME3Q13232 169 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 EIF4EBP2Q13542 120 aaPredicted RBP14.33□□□□□ -0.12
PRAME-209ENST00000439106 CDH18Q13634 790 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 PPM1JQ5JR12 505 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 EFHC1Q5JVL4 640 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 IL31Q6EBC2 164 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 FAM124AQ86V42 546 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 EPS8L1Q8TE68 723 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 DDX1Q92499 740 aaKnown RBP14.33□□□□□ -0.12
PRAME-209ENST00000439106 RNF34Q969K3 372 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 LMLNQ96KR4 655 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 TRIM62Q9BVG3 475 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 ASNSD1Q9NWL6 643 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 TMEM63CQ9P1W3 806 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 CEP83Q9Y592 693 aa14.33□□□□□ -0.12
PRAME-209ENST00000439106 NPC1O15118 1278 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 NDUFS2O75306 463 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 CFIP05156 583 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 POLR2EP19388 210 aaKnown RBP14.32□□□□□ -0.12
PRAME-209ENST00000439106 MAOBP27338 520 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 CSKP41240 450 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 TPMTP51580 245 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 COPB1P53618 953 aaKnown RBP14.32□□□□□ -0.12
PRAME-209ENST00000439106 LIMK1P53667 647 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 BPIFB4P59827 614 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 POLR2FP61218 127 aaKnown RBP14.32□□□□□ -0.12
PRAME-209ENST00000439106 FOXK2Q01167 660 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 MYL5Q02045 173 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 MPP7Q5T2T1 576 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 SLC36A4Q6YBV0 504 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 SLC26A9Q7LBE3 791 aa14.32□□□□□ -0.12
PRAME-209ENST00000439106 SYT12Q8IV01 421 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms