RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ABCC13Q9NSE7 274 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC39A10Q9ULF5 831 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 FAF1Q9UNN5 650 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 USP12O75317 370 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 UBTFL6P0CB48 400 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZNF177Q13360 481 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 TRIM67Q6ZTA4 783 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 TMC7Q7Z402 723 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 AGAP11Q8TF27 550 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 LPIN3Q9BQK8 851 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 TUBB6Q9BUF5 446 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 TXLNGYQ9BZA5 131 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 ARHGEF38Q9NXL2 777 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 GTSE1Q9NYZ3 720 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 CTNNAL1Q9UBT7 734 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 Q9Y3F1 56 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 WNT7BP56706 349 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 RAD51Q06609 339 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 FOXD4Q12950 439 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 PTP4A2Q12974 167 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 STX3Q13277 289 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 BMPR2Q13873 1038 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 MAP7Q14244 749 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 TIGD7Q6NT04 549 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC26A9Q7LBE3 791 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 DDX1Q92499 740 aaKnown RBP11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 SEC14L1Q92503 715 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 MS4A4AQ96JQ5 239 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 SMPD4Q9NXE4 827 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 GRID1Q9ULK0 1009 aa11.88□□□□□ -0.51
TRAPPC9-202ENST00000438773 SCN9AQ15858 1988 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 MYBPHLA2RUH7 354 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 PAPSS1O43252 624 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 LRG1P02750 347 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 CD48P09326 243 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 ERCC2P18074 760 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 CYP3A5P20815 502 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 MMP13P45452 471 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 HTRA3P83110 453 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC25A52Q3SY17 297 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 C1orf146Q5VVC0 180 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 TAS2R42Q7RTR8 314 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 NT5MQ9NPB1 228 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 HAO1Q9UJM8 370 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 VANGL2Q9ULK5 521 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 DNAJC6O75061 913 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 MBL2P11226 248 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 STX1BP61266 288 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 IKBKEQ14164 716 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 TMEM259Q4ZIN3 620 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 GDF6Q6KF10 455 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 OLIG1Q8TAK6 271 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 LGMNQ99538 433 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 ETNK2Q9NVF9 386 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 MARCH2Q9P0N8 246 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 EFR3BQ9Y2G0 817 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 SF3B1O75533 1304 aaKnown RBP eCLIP11.87□□□□□ -0.512e-6■■■■■ 136.1
TRAPPC9-202ENST00000438773 STBD1O95210 358 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 OR4Q2P0C623 313 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 TPH1P17752 444 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 ACLYP53396 1101 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 SPDYCQ5MJ68 293 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 TLDC1Q6P9B6 456 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 STRADAQ7RTN6 431 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 MRPS31Q92665 395 aaKnown RBP11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 HAPLN2Q9GZV7 340 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 TASP1Q9H6P5 420 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC12A4Q9UP95 1085 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 LY75O60449 1722 aa11.87□□□□□ -0.51
TRAPPC9-202ENST00000438773 C2CD4BA6NLJ0 364 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 HACD1B0YJ81 288 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 E5RI56 91 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 H0Y626 953 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 INHAP05111 366 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 ZCCHC18P0CG32 403 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 CHRM1P11229 460 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 NSUN2Q08J23 767 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 CDH18Q13634 790 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 PKN2Q16513 984 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 DDR2Q16832 855 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 XYLT2Q9H1B5 865 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 FAM124BQ9H5Z6 455 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 GRHL1Q9NZI5 618 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 NENFQ9UMX5 172 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 GABRQQ9UN88 632 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 SLC27A5Q9Y2P5 690 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 MYO9BQ13459 2157 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 MGAT1P26572 445 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 C1QTNF8P60827 252 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 MARC1Q5VT66 337 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 RGS9BPQ6ZS82 235 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 PIGWQ7Z7B1 504 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 BLOC1S5Q8TDH9 187 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 ELMO2Q96JJ3 720 aa11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 TSR3Q9UJK0 312 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 CASQ2O14958 399 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 KIF1CO43896 1103 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-202ENST00000438773 BANF1O75531 89 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms