RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 GRIK3Q13003 919 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 WSCD1Q658N2 575 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 C16orf46Q6P387 395 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 KCNMB4Q86W47 210 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 MAP3K14Q99558 947 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 CDC42EP4Q9H3Q1 356 aaKnown RBP10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ARHGEF3Q9NR81 526 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 KIAA1257Q9ULG3 409 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 CASZ1Q86V15 1759 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 WTIPA6NIX2 430 aaPredicted RBP10.56□□□□□ -0.72
SHPRH-206ENST00000438092 NKRFO15226 690 aaKnown RBP eCLIP10.56□□□□□ -0.72
SHPRH-206ENST00000438092 CPA3P15088 417 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 IL5RAQ01344 420 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 TRIM25Q14258 630 aaKnown RBP10.56□□□□□ -0.72
SHPRH-206ENST00000438092 PLPP4Q5VZY2 271 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ZNF470Q6ECI4 717 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 REXO1L1PQ8IX06 675 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 EMID1Q96A84 441 aaPredicted RBP10.56□□□□□ -0.72
SHPRH-206ENST00000438092 MARK4Q96L34 752 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 DRG1Q9Y295 367 aaKnown RBP10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ACOT9Q9Y305 439 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 VIL1P09327 827 aaKnown RBP10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ZCCHC18P0CG32 403 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 SRSF11Q05519 484 aaKnown RBP10.56□□□□□ -0.72
SHPRH-206ENST00000438092 KLC1Q07866 573 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 DAB2IPQ5VWQ8 1189 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 C4orf19Q8IY42 314 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 COLGALT2Q8IYK4 626 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 SOCS4Q8WXH5 440 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 DNAJC9Q8WXX5 260 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ZBTB10Q96DT7 871 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 TMEM120AQ9BXJ8 343 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 FAM25AB3EWG3 89 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 FAM25CB3EWG5 89 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 FAM25GB3EWG6 89 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 OR56A5P0C7T3 313 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 AP5B1Q2VPB7 878 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 NPNTQ6UXI9 565 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ZCCHC23Q6ZST2 131 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 BTN2A1Q7KYR7 527 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 RIBC1Q8N443 379 aaPredicted RBP10.56□□□□□ -0.72
SHPRH-206ENST00000438092 CXorf40AQ8TE69 158 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 SLC5A5Q92911 643 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 CCT8L1PA6NM43 557 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 TRIM66O15016 1216 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 TBL1XO60907 577 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 NFKB1P19838 968 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 TAF13Q15543 124 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ZNF621Q6ZSS3 439 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 MTDHQ86UE4 582 aaKnown RBP10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ACTL9Q8TC94 416 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ELMO1Q92556 727 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 EXOC2Q96KP1 924 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 SERPINB12Q96P63 405 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ERGIC2Q96RQ1 377 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 TBL1YQ9BQ87 522 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 ADI1Q9BV57 179 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 DLGAP2Q9P1A6 1054 aa10.56□□□□□ -0.72
SHPRH-206ENST00000438092 MAPK10P53779 464 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 ITGA9Q13797 1035 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 OR10G6Q8NH81 332 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 SENP8Q96LD8 212 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 CDK5RAP1Q96SZ6 601 aaKnown RBP10.55□□□□□ -0.72
SHPRH-206ENST00000438092 ULBP1Q9BZM6 244 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 REXO4Q9GZR2 422 aaKnown RBP10.55□□□□□ -0.72
SHPRH-206ENST00000438092 IL17RBQ9NRM6 502 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 SIK3Q9Y2K2 1263 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 E5RJQ4 531 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 H3BN98 237 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 RAD51BO15315 384 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 TPBGLP0DKB5 382 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 PTPN3P26045 913 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 ATAD3BQ5T9A4 648 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 FBXO39Q8N4B4 442 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 DAGLBQ8NCG7 672 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 SNRNP27Q8WVK2 155 aaKnown RBP10.55□□□□□ -0.72
SHPRH-206ENST00000438092 ZNF606Q8WXB4 792 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 HDHD2Q9H0R4 259 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 VTA1Q9NP79 307 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 MPP6Q9NZW5 540 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 UBA2Q9UBT2 640 aaPredicted RBP10.55□□□□□ -0.72
SHPRH-206ENST00000438092 RAB23Q9ULC3 237 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 TLL1O43897 1013 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 PSMA3P25788 255 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 PPP2R1BP30154 601 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 SLC1A6P48664 564 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 NCF4Q15080 339 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 C15orf59Q2T9L4 293 aaPredicted RBP10.55□□□□□ -0.72
SHPRH-206ENST00000438092 RAET1GQ6H3X3 334 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 RETSATQ6NUM9 610 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 WDR36Q8NI36 951 aaKnown RBP10.55□□□□□ -0.72
SHPRH-206ENST00000438092 RNASE11Q8TAA1 199 aaKnown RBP10.55□□□□□ -0.72
SHPRH-206ENST00000438092 CCDC126Q96EE4 140 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 EFCAB1Q9HAE3 211 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 MRPS23Q9Y3D9 190 aaKnown RBP10.55□□□□□ -0.72
SHPRH-206ENST00000438092 CLDN5O00501 218 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 PIRTP0C851 137 aa10.55□□□□□ -0.72
SHPRH-206ENST00000438092 IRX1P78414 480 aaPredicted RBP10.55□□□□□ -0.72
SHPRH-206ENST00000438092 N4BP2L1Q5TBK1 243 aaPredicted RBP10.55□□□□□ -0.72
SHPRH-206ENST00000438092 CDK20Q8IZL9 346 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms