RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 XPOTO43592 962 aaKnown RBP17.2■□□□□ 0.34
TTC3-209ENST00000438055 ITGA2BP08514 1039 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 TPH1P17752 444 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 POU5F1BQ06416 359 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 HIC1Q14526 733 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 PRAMEF19Q5SWL8 479 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 ZNF534Q76KX8 674 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 RNF169Q8NCN4 708 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 TSNARE1Q96NA8 513 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 NDE1Q9NXR1 346 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 SIRPGQ9P1W8 387 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 NME7Q9Y5B8 376 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 RLFQ13129 1914 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 SMIM24O75264 130 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 UBTFL6P0CB48 400 aaPredicted RBP17.2■□□□□ 0.34
TTC3-209ENST00000438055 DNAL1Q4LDG9 190 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 ANO7Q6IWH7 933 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 TAPT1Q6NXT6 567 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 ENDOVQ8N8Q3 282 aaKnown RBP17.2■□□□□ 0.34
TTC3-209ENST00000438055 USP33Q8TEY7 942 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 AZIN2Q96A70 460 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 RTP4Q96DX8 246 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 SCYL1Q96KG9 808 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 SNX27Q96L92 541 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 VTA1Q9NP79 307 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 SCOCQ9UIL1 159 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 LRRC42Q9Y546 428 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 POLR2AP24928 1970 aaKnown RBP17.2■□□□□ 0.34
TTC3-209ENST00000438055 ZMPSTE24O75844 475 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 PDE5AO76074 875 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 GSTA2P09210 222 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 MX2P20592 715 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 MATKP42679 507 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 TPI1P60174 286 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 PDE1CQ14123 709 aaPredicted RBP17.2■□□□□ 0.34
TTC3-209ENST00000438055 STRA8Q7Z7C7 330 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 SREK1Q8WXA9 508 aaKnown RBP17.2■□□□□ 0.34
TTC3-209ENST00000438055 PLAC1Q9HBJ0 212 aa17.2■□□□□ 0.34
TTC3-209ENST00000438055 SMIM28A0A1B0GU29 152 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 NEMP1O14524 444 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 KLF11O14901 512 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 USP1O94782 785 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 CD4P01730 458 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 RALBP11234 206 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 SEMA5AQ13591 1074 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 HSP90AA5PQ58FG0 334 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 SPDYAQ5MJ70 313 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 KYAT3Q6YP21 454 aaKnown RBP17.19■□□□□ 0.34
TTC3-209ENST00000438055 ZNF410Q86VK4 478 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 ULK2Q8IYT8 1036 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 UCMAQ8WVF2 138 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 MAN1C1Q9NR34 630 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 SPTLC1O15269 473 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 PGAM1P18669 254 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 AP2B1P63010 937 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 MRPS35P82673 323 aaKnown RBP17.19■□□□□ 0.34
TTC3-209ENST00000438055 PEX6Q13608 980 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 CUL3Q13618 768 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 PDZD4Q76G19 769 aaPredicted RBP17.19■□□□□ 0.34
TTC3-209ENST00000438055 TLE6Q9H808 572 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 PLEKHA5Q9HAU0 1116 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 MTMR10Q9NXD2 777 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 RPL26L1Q9UNX3 145 aaKnown RBP17.19■□□□□ 0.34
TTC3-209ENST00000438055 HMX2A2RU54 273 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 E9PBE3 544 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 KLHL41O60662 606 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 OPHN1O60890 802 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 NCAM1P13591 858 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 HOXA11P31270 313 aaPredicted RBP17.19■□□□□ 0.34
TTC3-209ENST00000438055 TKTL1P51854 596 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 CES4AQ5XG92 561 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 NXNQ6DKJ4 435 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 CTU1Q7Z7A3 348 aaKnown RBP17.19■□□□□ 0.34
TTC3-209ENST00000438055 LRRC52Q8N7C0 313 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 LENG1Q96BZ8 264 aaPredicted RBP17.19■□□□□ 0.34
TTC3-209ENST00000438055 CAB39LQ9H9S4 337 aa17.19■□□□□ 0.34
TTC3-209ENST00000438055 DPPA5A6NC42 116 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 TXNDC9O14530 226 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 ALDOAP04075 364 aaKnown RBP17.18■□□□□ 0.34
TTC3-209ENST00000438055 SMPD1P17405 629 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 SYPL2Q5VXT5 272 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 B3GALNT2Q8NCR0 500 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 GSTCDQ8NEC7 633 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 EDEM1Q92611 657 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 DDIT4Q9NX09 232 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 TMEM216Q9P0N5 145 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 DCDC2Q9UHG0 476 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 GOLGA8QA0A0J9YX86 632 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 GOLGA8OA6NCC3 632 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 GOLGA8NF8WBI6 632 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 PDHXO00330 501 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 SMNDC1O75940 238 aaKnown RBP eCLIP17.18■□□□□ 0.341e-23■■■■■ 42.4
TTC3-209ENST00000438055 TKTP29401 623 aaKnown RBP17.18■□□□□ 0.34
TTC3-209ENST00000438055 PKDCCQ504Y2 493 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 WSCD1Q658N2 575 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 RWDD4Q6NW29 188 aaKnown RBP17.18■□□□□ 0.34
TTC3-209ENST00000438055 KDELC2Q7Z4H8 507 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 ZNF567Q8N184 647 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 APBB2Q92870 758 aa17.18■□□□□ 0.34
TTC3-209ENST00000438055 ANKRD27Q96NW4 1050 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms