RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 SETDB1Q15047 1291 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 KLHL38Q2WGJ6 581 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 EML3Q32P44 896 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 PPM1JQ5JR12 505 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 HEATR6Q6AI08 1181 aaKnown RBP9.76□□□□□ -0.85
CUX1-206ENST00000437600 ZNF534Q76KX8 674 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 NDUFAF2Q8N183 169 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 VPS52Q8N1B4 723 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 RIBC1Q8N443 379 aaPredicted RBP9.76□□□□□ -0.85
CUX1-206ENST00000437600 PNPLA1Q8N8W4 532 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 SLC44A1Q8WWI5 657 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 AZIN2Q96A70 460 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 PPP1R10Q96QC0 940 aaKnown RBP9.76□□□□□ -0.85
CUX1-206ENST00000437600 KLC2Q9H0B6 622 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 POPDC2Q9HBU9 364 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 PIGVQ9NUD9 493 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 ZNF358Q9NW07 568 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 PAK5Q9P286 719 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 DERAQ9Y315 318 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 TTLL3Q9Y4R7 772 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.76□□□□□ -0.85
CUX1-206ENST00000437600 YJEFN3A6XGL0 299 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 E7ENQ6 273 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 COPEO14579 308 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 MFSD11O43934 449 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 UPP2O95045 317 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 UNC5CO95185 931 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 STAU1O95793 577 aaKnown RBP9.76□□□□□ -0.85
CUX1-206ENST00000437600 TPH1P17752 444 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 BST2Q10589 180 aaKnown RBP9.76□□□□□ -0.85
CUX1-206ENST00000437600 ACAP1Q15027 740 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 PDK2Q15119 407 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 SV2CQ496J9 727 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 NCBP2-AS2Q69YL0 99 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 SLC9A4Q6AI14 798 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 DSTYKQ6XUX3 929 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 COLGALT1Q8NBJ5 622 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 SLC7A14Q8TBB6 771 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 C10orf82Q8WW14 230 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 SIGLEC10Q96LC7 697 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 IQCGQ9H095 443 aaKnown RBP9.76□□□□□ -0.85
CUX1-206ENST00000437600 PAK6Q9NQU5 681 aaPredicted RBP9.76□□□□□ -0.85
CUX1-206ENST00000437600 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.76□□□□□ -0.853e-6■■■■□ 19.4
CUX1-206ENST00000437600 NKX1-2Q9UD57 310 aaPredicted RBP9.76□□□□□ -0.85
CUX1-206ENST00000437600 STARD13Q9Y3M8 1113 aa9.76□□□□□ -0.85
CUX1-206ENST00000437600 SPTBN5Q9NRC6 3674 aaKnown RBP9.76□□□□□ -0.85
CUX1-206ENST00000437600 CAPN9O14815 690 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 XPOTO43592 962 aaKnown RBP9.75□□□□□ -0.85
CUX1-206ENST00000437600 ENTPD5O75356 428 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 SKAP2O75563 359 aaPredicted RBP9.75□□□□□ -0.85
CUX1-206ENST00000437600 C1QAP02745 245 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 ERVK-10P10266 1014 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 EZRP15311 586 aaKnown RBP9.75□□□□□ -0.85
CUX1-206ENST00000437600 MGAT1P26572 445 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 TKTL1P51854 596 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 ZBTB16Q05516 673 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 LPIN1Q14693 890 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 NAA25Q14CX7 972 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 C11orf91Q3C1V1 193 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 ANKRD20A2Q5SQ80 823 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 WLSQ5T9L3 541 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 ANKRD20A1Q5TYW2 823 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 ANKRD20A3Q5VUR7 823 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 PID1Q7Z2X4 250 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 ALYREFQ86V81 257 aaKnown RBP9.75□□□□□ -0.85
CUX1-206ENST00000437600 DHRS4Q9BTZ2 278 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 TSSK1BQ9BXA7 367 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 PRDM12Q9H4Q4 367 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 LRRC4Q9HBW1 653 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 ARHGEF3Q9NR81 526 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 KIAA1257Q9ULG3 409 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 USH1CQ9Y6N9 552 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 IQANK1A0A1B0GTG1 560 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 ANP32DO95626 131 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 GM2AP17900 193 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 CST5P28325 142 aaPredicted RBP9.75□□□□□ -0.85
CUX1-206ENST00000437600 MRPS5P82675 430 aaKnown RBP9.75□□□□□ -0.85
CUX1-206ENST00000437600 TIGD5Q53EQ6 642 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 C1QTNF12Q5T7M4 302 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 SH2D5Q6ZV89 423 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 SLC26A11Q86WA9 606 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 P2RY11Q96G91 374 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 CELF6Q96J87 481 aaKnown RBP9.75□□□□□ -0.85
CUX1-206ENST00000437600 TMEM209Q96SK2 561 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 TBC1D10AQ9BXI6 508 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 UNKQ9C0B0 810 aaKnown RBP9.75□□□□□ -0.85
CUX1-206ENST00000437600 SIK2Q9H0K1 926 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 CRTAC1Q9NQ79 661 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 KRT82Q9NSB4 513 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 ZFP69BQ9UJL9 534 aa9.75□□□□□ -0.85
CUX1-206ENST00000437600 TNRC18O15417 2968 aaPredicted RBP9.75□□□□□ -0.85
CUX1-206ENST00000437600 DIAPH2O60879 1101 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 LYPLA1O75608 230 aaPredicted RBP9.74□□□□□ -0.85
CUX1-206ENST00000437600 SRGAP2BP0DMP2 458 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 MYL2P10916 166 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 NCAM1P13591 858 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 PTPN1P18031 435 aaKnown RBP9.74□□□□□ -0.85
CUX1-206ENST00000437600 SAT1P21673 171 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 PSMB4P28070 264 aa9.74□□□□□ -0.85
CUX1-206ENST00000437600 SERPINB4P48594 390 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms