RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 PDPK2PQ6A1A2 396 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 KLHL35Q6PF15 583 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 BBS12Q6ZW61 710 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 MAVSQ7Z434 540 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 C11orf96Q7Z7L8 435 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 ZNF554Q86TJ5 538 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 KBTBD6Q86V97 674 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 RIOX2Q8IUF8 465 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 IQCF2Q8IXL9 164 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 FBXW8Q8N3Y1 598 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 LZICQ8WZA0 190 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 KLHL2O95198 593 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 TNNC2P02585 160 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 YWHAZP63104 245 aaKnown RBP12.72□□□□□ -0.37
TMEM116-202ENST00000437003 SFSWAPQ12872 951 aaKnown RBP12.72□□□□□ -0.37
TMEM116-202ENST00000437003 SURF1Q15526 300 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 HSDL1Q3SXM5 330 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 NOL9Q5SY16 702 aaKnown RBP12.72□□□□□ -0.37
TMEM116-202ENST00000437003 LGSNQ5TDP6 509 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 ADGRF2Q8IZF7 708 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 RNF148Q8N7C7 305 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 UBA3Q8TBC4 463 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 FAM167AQ96KS9 214 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 LRGUKQ96M69 825 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 TWNKQ96RR1 684 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 MRPS26Q9BYN8 205 aaKnown RBP12.72□□□□□ -0.37
TMEM116-202ENST00000437003 SPATC1LQ9H0A9 340 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 Q9H521 79 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 SLC17A6Q9P2U8 582 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 RABL2BQ9UNT1 228 aa12.72□□□□□ -0.37
TMEM116-202ENST00000437003 CASQ2O14958 399 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-202ENST00000437003 C1QAP02745 245 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 HOXC6P09630 235 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 EDNRBP24530 442 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 PTPN7P35236 360 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 GMPRP36959 345 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 SLC1A6P48664 564 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 HDAC4P56524 1084 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 YWHAEP62258 255 aaKnown RBP12.71□□□□□ -0.37
TMEM116-202ENST00000437003 VGLL4Q14135 290 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 FAM102AQ5T9C2 384 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-202ENST00000437003 ATG14Q6ZNE5 492 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 NIPA2Q8N8Q9 360 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 AGR3Q8TD06 166 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 ANKRD36BP1Q96IX9 119 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 SIKE1Q9BRV8 207 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 XYLT2Q9H1B5 865 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 RETREG1Q9H6L5 497 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 COPS7BQ9H9Q2 264 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-202ENST00000437003 TIMMDC1Q9NPL8 285 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.71□□□□□ -0.37
TMEM116-202ENST00000437003 RGS17Q9UGC6 210 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-202ENST00000437003 PCDHGC3Q9UN70 934 aa12.71□□□□□ -0.37
TMEM116-202ENST00000437003 ARHGAP10A1A4S6 786 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 E9PBE3 544 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 H7C0C1 242 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 M0QYV0 167 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 DENRO43583 198 aaKnown RBP12.71□□□□□ -0.38
TMEM116-202ENST00000437003 KLHL41O60662 606 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 USP2O75604 605 aaPredicted RBP12.71□□□□□ -0.38
TMEM116-202ENST00000437003 KRT38O76015 456 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 TNFAIP8O95379 198 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 APRTP07741 180 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 ATP5OP48047 213 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 EEF1DP3Q658K8 133 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 DLK2Q6UY11 383 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.38
TMEM116-202ENST00000437003 ITGA11Q9UKX5 1188 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 USP18Q9UMW8 372 aa12.71□□□□□ -0.38
TMEM116-202ENST00000437003 FAF1Q9UNN5 650 aaPredicted RBP12.71□□□□□ -0.38
TMEM116-202ENST00000437003 GNEQ9Y223 722 aaKnown RBP12.71□□□□□ -0.38
TMEM116-202ENST00000437003 HMX2A2RU54 273 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 AIM2O14862 343 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 TIMM44O43615 452 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 PEX1O43933 1283 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 ARIH2O95376 493 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 CDH5P33151 784 aaPredicted RBP12.7□□□□□ -0.38
TMEM116-202ENST00000437003 IDH3AP50213 366 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 CDH6P55285 790 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 ROR1Q01973 937 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 SULT2A1Q06520 285 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 KCNJ11Q14654 390 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 ZNF667Q5HYK9 610 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 TEDDM1Q5T9Z0 273 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 MPZL3Q6UWV2 235 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 GADL1Q6ZQY3 521 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 XYLT1Q86Y38 959 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 RNF168Q8IYW5 571 aaPredicted RBP12.7□□□□□ -0.38
TMEM116-202ENST00000437003 RIN3Q8TB24 985 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 CMTM5Q96DZ9 223 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 SDCBP2Q9H190 292 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 PLAC1Q9HBJ0 212 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 POPDC2Q9HBU9 364 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 PSMD13Q9UNM6 376 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 SORCS3Q9UPU3 1222 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 HEY1Q9Y5J3 304 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 COMMD10Q9Y6G5 202 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 PGK2P07205 417 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 NFICP08651 508 aa12.7□□□□□ -0.38
TMEM116-202ENST00000437003 TSHRP16473 764 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms