RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 STXBP5Q5T5C0 1151 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 SYPL2Q5VXT5 272 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 CASC4Q6P4E1 433 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 STKLD1Q8NE28 680 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 ACMSDQ8TDX5 336 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 ARNTL2Q8WYA1 636 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 CDKL2Q92772 493 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 NTAN1Q96AB6 310 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 MIPEPQ99797 713 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 KRT82Q9NSB4 513 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 ARL8BQ9NVJ2 186 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 IGSF9Q9P2J2 1179 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 SYNJ2BP-COX16A0A087WUM0 186 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 EEF2KO00418 725 aaKnown RBP19.12■□□□□ 0.65
CLK1-205ENST00000434813 DCLK1O15075 740 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 PEX11AO75192 247 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 FBXO21O94952 628 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 BPGMP07738 259 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 PSMB4P28070 264 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 CRYMQ14894 314 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 CHI3L2Q15782 390 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 KYAT3Q6YP21 454 aaKnown RBP19.12■□□□□ 0.65
CLK1-205ENST00000434813 NUDCD3Q8IVD9 361 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 GIMAP7Q8NHV1 300 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 SH3TC2Q8TF17 1288 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 ZFP42Q96MM3 310 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 MED10Q9BTT4 135 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 PRDM12Q9H4Q4 367 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 RNPEPL1Q9HAU8 725 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 COX16Q9P0S2 106 aa19.12■□□□□ 0.65
CLK1-205ENST00000434813 FAM237BA0A1B0GVD1 139 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 F5H423 210 aaPredicted RBP19.11■□□□□ 0.65
CLK1-205ENST00000434813 CREB3O43889 395 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 SNNO75324 88 aaPredicted RBP19.11■□□□□ 0.65
CLK1-205ENST00000434813 ALDH1A1P00352 501 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 AKR1A1P14550 325 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 MGAT1P26572 445 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 TKTL1P51854 596 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 SCAPQ12770 1279 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 NME3Q13232 169 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 KIAA0319Q5VV43 1072 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 CES4AQ5XG92 561 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 HFE2Q6ZVN8 426 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 ZNF567Q8N184 647 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 NSMCE1Q8WV22 266 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 PRR11Q96HE9 360 aaPredicted RBP19.11■□□□□ 0.65
CLK1-205ENST00000434813 NSL1Q96IY1 281 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 ZIC5Q96T25 663 aa19.11■□□□□ 0.65
CLK1-205ENST00000434813 ZNF638Q14966 1978 aaKnown RBP19.11■□□□□ 0.65
CLK1-205ENST00000434813 C9IYK1 514 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 GNAT1P11488 350 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 CALB2P22676 271 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 CCNG1P51959 295 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 MAP3K7CLP57077 242 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 GJA9P57773 515 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 SESN2P58004 480 aaPredicted RBP19.1■□□□□ 0.65
CLK1-205ENST00000434813 CRADDP78560 199 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 BEX3Q00994 111 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 PACS1Q6VY07 963 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 UNC5BQ8IZJ1 945 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 RNF169Q8NCN4 708 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 CCNYQ8ND76 341 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 BTBD10Q9BSF8 475 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 CRTAC1Q9NQ79 661 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 SLC38A7Q9NVC3 462 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 DDX43Q9NXZ2 648 aaKnown RBP19.1■□□□□ 0.65
CLK1-205ENST00000434813 RAD54BQ9Y620 910 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.1■□□□□ 0.65
CLK1-205ENST00000434813 CCDC195A0A1B0GUA6 201 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 FCHO1O14526 889 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 FYNP06241 537 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 GM2AP17900 193 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 DAOAP59103 153 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 SEMA3BQ13214 749 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 FSCN1Q16658 493 aaKnown RBP19.1■□□□□ 0.65
CLK1-205ENST00000434813 CEP41Q9BYV8 373 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 ULBP1Q9BZM6 244 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 SEPT10Q9P0V9 454 aa19.1■□□□□ 0.65
CLK1-205ENST00000434813 C2orf71A6NGG8 1288 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 NRP1O14786 923 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 ALDOAP04075 364 aaKnown RBP19.09■□□□□ 0.65
CLK1-205ENST00000434813 CTGFP29279 349 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 ELF1P32519 619 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 ADRA1BP35368 520 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 DEFB115Q30KQ5 88 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 TAF2Q6P1X5 1199 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 FAM35AQ86V20 835 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 TMEM86AQ8N2M4 240 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 ENDOVQ8N8Q3 282 aaKnown RBP19.09■□□□□ 0.65
CLK1-205ENST00000434813 NETO2Q8NC67 525 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 SLC7A14Q8TBB6 771 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 PGBD4Q96DM1 585 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 SENP8Q96LD8 212 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 SYT15Q9BQS2 421 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 CADM1Q9BY67 442 aaKnown RBP19.09■□□□□ 0.65
CLK1-205ENST00000434813 WWP1Q9H0M0 922 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 TSPYL2Q9H2G4 693 aaPredicted RBP19.09■□□□□ 0.65
CLK1-205ENST00000434813 WDR6Q9NNW5 1121 aaKnown RBP19.09■□□□□ 0.65
CLK1-205ENST00000434813 XPNPEP3Q9NQH7 507 aa19.09■□□□□ 0.65
CLK1-205ENST00000434813 CNGB3Q9NQW8 809 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms