RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 RRN3Q9NYV6 651 aa16.71■□□□□ 0.26
MBD4-203ENST00000429544 FRMPD3Q5JV73 1810 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 M0QZQ0 153 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 KRT37O76014 449 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 SNRPAP09012 282 aaKnown RBP16.7■□□□□ 0.26
MBD4-203ENST00000429544 BMPR2Q13873 1038 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 BSPRYQ5W0U4 402 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 RNF43Q68DV7 783 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 CASC4Q6P4E1 433 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 SH2D5Q6ZV89 423 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 TAC4Q86UU9 113 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 LRRTM3Q86VH5 581 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 PCSK9Q8NBP7 692 aaKnown RBP16.7■□□□□ 0.26
MBD4-203ENST00000429544 PKMYT1Q99640 499 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 ZNF180Q9UJW8 692 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 DSEQ9UL01 958 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 FAM159BA6NKW6 160 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 KCNK1O00180 336 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 SESN2P58004 480 aaPredicted RBP16.7■□□□□ 0.26
MBD4-203ENST00000429544 CDK16Q00536 496 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 FAM111AQ96PZ2 611 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 TKTL2Q9H0I9 626 aa16.7■□□□□ 0.26
MBD4-203ENST00000429544 NUP205Q92621 2012 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 F9P00740 461 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 MGAT1P26572 445 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 IFRD2Q12894 506 aaPredicted RBP16.69■□□□□ 0.26
MBD4-203ENST00000429544 FAM26DQ5JW98 314 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 LRRC8BQ6P9F7 803 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 PDZD4Q76G19 769 aaPredicted RBP16.69■□□□□ 0.26
MBD4-203ENST00000429544 ZNF276Q8N554 614 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 FITM2Q8N6M3 262 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 NPWQ8N729 165 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 DEPDC1BQ8WUY9 529 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 IRGQQ8WZA9 623 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 UROC1Q96N76 676 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 WDCPQ9H6R7 721 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 EIF2B3Q9NR50 452 aaKnown RBP16.69■□□□□ 0.26
MBD4-203ENST00000429544 ALDH1A1P00352 501 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 MLNP12872 115 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 CXCR3P49682 368 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 PARP6Q2NL67 630 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 GALNTL6Q49A17 601 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 PM20D1Q6GTS8 502 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 OTOAQ7RTW8 1153 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 PID1Q7Z2X4 250 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 ZNF598Q86UK7 904 aaKnown RBP16.69■□□□□ 0.26
MBD4-203ENST00000429544 UNC5BQ8IZJ1 945 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 SCAMP5Q8TAC9 235 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 RXFP1Q9HBX9 757 aa16.69■□□□□ 0.26
MBD4-203ENST00000429544 KLHL8Q9P2G9 620 aaPredicted RBP16.69■□□□□ 0.26
MBD4-203ENST00000429544 CEP350Q5VT06 3117 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 MYO16Q9Y6X6 1858 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 COL4A4P53420 1690 aaPredicted RBP16.68■□□□□ 0.26
MBD4-203ENST00000429544 COPEO14579 308 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 SKIP12755 728 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 HCAR3P49019 387 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 TSPY1Q01534 308 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 LGSNQ5TDP6 509 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 STEAP4Q687X5 459 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 THEM5Q8N1Q8 247 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 RNF34Q969K3 372 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 TTC17Q96AE7 1141 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 ECT2Q9H8V3 914 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 OR12D3Q9UGF7 316 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 SDR42E2A6NKP2 422 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 RASSF9O75901 435 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 PTPN3P26045 913 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 ETV4P43268 484 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 ACLYP53396 1101 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 DCLRE1AQ6PJP8 1040 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 DQX1Q8TE96 717 aaKnown RBP16.68■□□□□ 0.26
MBD4-203ENST00000429544 OXNAD1Q96HP4 312 aaPredicted RBP16.68■□□□□ 0.26
MBD4-203ENST00000429544 SRPK1Q96SB4 655 aaKnown RBP16.68■□□□□ 0.26
MBD4-203ENST00000429544 EPAS1Q99814 870 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 IQCGQ9H095 443 aaKnown RBP16.68■□□□□ 0.26
MBD4-203ENST00000429544 VPS11Q9H270 941 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 IGSF9Q9P2J2 1179 aa16.68■□□□□ 0.26
MBD4-203ENST00000429544 B4GALT3O60512 393 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 KRT38O76015 456 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 DHRS4L1P0CG22 281 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 HNRNPH1P31943 449 aaKnown RBP16.67■□□□□ 0.26
MBD4-203ENST00000429544 NCALDP61601 193 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 OLIG2Q13516 323 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 RNF180Q86T96 592 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 GBP7Q8N8V2 638 aaPredicted RBP16.67■□□□□ 0.26
MBD4-203ENST00000429544 ANKLE1Q8NAG6 615 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 SMC1BQ8NDV3 1235 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 PTPRN2Q92932 1015 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 MANSC1Q9H8J5 431 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 SYBUQ9NX95 663 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 MOCS1Q9NZB8 636 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 SLC17A6Q9P2U8 582 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 RAD54BQ9Y620 910 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.67■□□□□ 0.26
MBD4-203ENST00000429544 AOC2O75106 756 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 LRIG2O94898 1065 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 EPHB2P29323 1055 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 SP3Q02447 781 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 PPIDQ08752 370 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms