RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 FERMT1Q9BQL6 677 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 FRMD8Q9BZ67 464 aaPredicted RBP10.72□□□□□ -0.69
HDAC9-210ENST00000428307 ZCWPW1Q9H0M4 648 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 PLAC1Q9HBJ0 212 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 ABCC13Q9NSE7 274 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 ADAM28Q9UKQ2 775 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 IKBKGQ9Y6K9 419 aa10.72□□□□□ -0.69
HDAC9-210ENST00000428307 A0A1W2PQH9 124 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 CXorf49A8MYA2 514 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-210ENST00000428307 ALDH2P05091 517 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 CA4P22748 312 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 WDR4P57081 412 aaKnown RBP10.71□□□□□ -0.69
HDAC9-210ENST00000428307 OLIG2Q13516 323 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 SPARCL1Q14515 664 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 PLEKHG4Q58EX7 1191 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 NUGGCQ68CJ6 796 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 CASC4Q6P4E1 433 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 PDZD4Q76G19 769 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-210ENST00000428307 DCP1BQ8IZD4 617 aaKnown RBP10.71□□□□□ -0.69
HDAC9-210ENST00000428307 PPM1NQ8N819 430 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 MCUQ8NE86 351 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 SIGLEC10Q96LC7 697 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 DHRS4Q9BTZ2 278 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 CCDC134Q9H6E4 229 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 PPCSQ9HAB8 311 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 FGFR1OP2Q9NVK5 253 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 OSER1Q9NX31 292 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 KLHL8Q9P2G9 620 aaPredicted RBP10.71□□□□□ -0.69
HDAC9-210ENST00000428307 LRFN2Q9ULH4 789 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 SLC27A5Q9Y2P5 690 aa10.71□□□□□ -0.69
HDAC9-210ENST00000428307 TMEM189-UBE2V1I3L0A0 370 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 OPHN1O60890 802 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 MOCS2O96007 188 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 INHBAP08476 426 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 TPSB2P20231 275 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 HCAR3P49019 387 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 SESN2P58004 480 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 FAAP100Q0VG06 881 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 TPSAB1Q15661 275 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 ZKSCAN8Q15776 578 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 RNF187Q5TA31 235 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 UNC5AQ6ZN44 842 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 CACNA2D3Q8IZS8 1091 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 CKAP2Q8WWK9 683 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 CASD1Q96PB1 797 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 C12orf65Q9H3J6 166 aaKnown RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 PRDM16Q9HAZ2 1276 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 TTC3P53804 2025 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 MYO1CO00159 1063 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 DNM1LO00429 736 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 TRIM66O15016 1216 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 IRAK2O43187 625 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 USP12O75317 370 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 PAGE1O75459 146 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 TSHRP16473 764 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 FDFT1P37268 417 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 MAGEA3P43357 314 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 USP46P62068 366 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 SARNPP82979 210 aaKnown RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 RASA2Q15283 850 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 SMAD1Q15797 465 aaKnown RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 NFE2Q16621 373 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 TRMT10BQ6PF06 316 aaKnown RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 DEFB128Q7Z7B8 93 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 TMEM173Q86WV6 379 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 SLC44A1Q8WWI5 657 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 SEPT8Q92599 483 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 TGS1Q96RS0 853 aaKnown RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 EBNA1BP2Q99848 306 aaKnown RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 PPP1R12CQ9BZL4 782 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 SENP1Q9P0U3 644 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 FETUBQ9UGM5 382 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 TTLL3Q9Y4R7 772 aa10.7□□□□□ -0.7
HDAC9-210ENST00000428307 TDRD15B5MCY1 1934 aaKnown RBP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 SF3B1O75533 1304 aaKnown RBP eCLIP10.7□□□□□ -0.7
HDAC9-210ENST00000428307 WDR27A2RRH5 827 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 UGT1A9O60656 530 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 SPAG6O75602 509 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 UPP2O95045 317 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 CPB1P15086 417 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 PTPN3P26045 913 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 CCR1P32246 355 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 GBP2P32456 591 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-210ENST00000428307 SLC11A1P49279 550 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 SLC1A5Q15758 541 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 PARP6Q2NL67 630 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 MICALCLQ6ZW33 695 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 LRRC6Q86X45 466 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 UNC5BQ8IZJ1 945 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 NUP93Q8N1F7 819 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 SCML4Q8N228 414 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 SGSM3Q96HU1 749 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 FCRL2Q96LA5 508 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-210ENST00000428307 RNF208Q9H0X6 261 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 UGT1A7Q9HAW7 530 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 UGT1A10Q9HAW8 530 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 UGT1A8Q9HAW9 530 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 XAB2Q9HCS7 855 aaKnown RBP10.69□□□□□ -0.7
HDAC9-210ENST00000428307 SMYD2Q9NRG4 433 aa10.69□□□□□ -0.7
HDAC9-210ENST00000428307 SAMD15Q9P1V8 674 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms