RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 SPATA20Q8TB22 786 aa13.4□□□□□ -0.26
NELFE-203ENST00000426722 RHBDD1Q8TEB9 315 aa13.4□□□□□ -0.26
NELFE-203ENST00000426722 CYB5D2Q8WUJ1 264 aa13.4□□□□□ -0.26
NELFE-203ENST00000426722 SMARCE1Q969G3 411 aa13.4□□□□□ -0.26
NELFE-203ENST00000426722 TTC17Q96AE7 1141 aa13.4□□□□□ -0.26
NELFE-203ENST00000426722 CEP63Q96MT8 703 aa13.4□□□□□ -0.26
NELFE-203ENST00000426722 TIGD1Q96MW7 591 aa13.4□□□□□ -0.26
NELFE-203ENST00000426722 C6orf106Q9H6K1 298 aaPredicted RBP13.4□□□□□ -0.26
NELFE-203ENST00000426722 IL21RQ9HBE5 538 aa13.4□□□□□ -0.26
NELFE-203ENST00000426722 RALYQ9UKM9 306 aaKnown RBP13.4□□□□□ -0.26
NELFE-203ENST00000426722 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.4□□□□□ -0.26
NELFE-203ENST00000426722 PCDHB4Q9Y5E5 795 aa13.4□□□□□ -0.26
NELFE-203ENST00000426722 A0A1B0GVT2 93 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 GOLGA6L4A6NEF3 574 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 TAF4O00268 1085 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 PSMA7O14818 248 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 TBL1XO60907 577 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 DKK1O94907 266 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 CD27P26842 260 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 CSNK1EP49674 416 aaKnown RBP13.39□□□□□ -0.27
NELFE-203ENST00000426722 TBX4P57082 545 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 LRMPQ12912 555 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 ZNF776Q68DI1 518 aaPredicted RBP13.39□□□□□ -0.27
NELFE-203ENST00000426722 PMF1Q6P1K2 205 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 FOXR2Q6PJQ5 311 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 TMPRSS7Q7RTY8 843 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 SLCO6A1Q86UG4 719 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 CACUL1Q86Y37 369 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 MFN1Q8IWA4 741 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 CCDC117Q8IWD4 279 aaPredicted RBP13.39□□□□□ -0.27
NELFE-203ENST00000426722 PNPLA1Q8N8W4 532 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 HJURPQ8NCD3 748 aaPredicted RBP13.39□□□□□ -0.27
NELFE-203ENST00000426722 SNX19Q92543 992 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 IGSF8Q969P0 613 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 DHTKD1Q96HY7 919 aaPredicted RBP13.39□□□□□ -0.27
NELFE-203ENST00000426722 CCDC86Q9H6F5 360 aaKnown RBP13.39□□□□□ -0.27
NELFE-203ENST00000426722 TPX2Q9ULW0 747 aaKnown RBP13.39□□□□□ -0.27
NELFE-203ENST00000426722 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.39□□□□□ -0.27
NELFE-203ENST00000426722 LHX6Q9UPM6 363 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 FNDC3AQ9Y2H6 1198 aaKnown RBP13.39□□□□□ -0.27
NELFE-203ENST00000426722 NUMA1Q14980 2115 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 ADAMTS20P59510 1910 aa13.39□□□□□ -0.27
NELFE-203ENST00000426722 PAPSS1O43252 624 aaPredicted RBP13.38□□□□□ -0.27
NELFE-203ENST00000426722 SART1O43290 800 aaKnown RBP13.38□□□□□ -0.27
NELFE-203ENST00000426722 MSI1O43347 362 aaKnown RBP13.38□□□□□ -0.27
NELFE-203ENST00000426722 PCDHGA12O60330 932 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 RNASEH1O60930 286 aaKnown RBP13.38□□□□□ -0.27
NELFE-203ENST00000426722 CD70P32970 193 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 PMS1P54277 932 aaKnown RBP13.38□□□□□ -0.27
NELFE-203ENST00000426722 ARID5BQ14865 1188 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 KIF19Q2TAC6 998 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 FAM133BQ5BKY9 247 aaKnown RBP13.38□□□□□ -0.27
NELFE-203ENST00000426722 BEND5Q7L4P6 421 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 ELOA2Q8IYF1 753 aaPredicted RBP13.38□□□□□ -0.27
NELFE-203ENST00000426722 PPM1KQ8N3J5 372 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 GALNT15Q8N3T1 639 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 TFAP2BQ92481 460 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 SKA1Q96BD8 255 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 BIRC7Q96CA5 298 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 LMLNQ96KR4 655 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 SERPINB11Q96P15 392 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 TRIM62Q9BVG3 475 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 RSPH9Q9H1X1 276 aaPredicted RBP13.38□□□□□ -0.27
NELFE-203ENST00000426722 GDPD2Q9HCC8 539 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 TM9SF3Q9HD45 589 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 DKK4Q9UBT3 224 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 TLR6Q9Y2C9 796 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 ANKRD6Q9Y2G4 727 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 SNX11Q9Y5W9 270 aa13.38□□□□□ -0.27
NELFE-203ENST00000426722 FAM208BQ5VWN6 2430 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 TARSL2A2RTX5 802 aaKnown RBP13.37□□□□□ -0.27
NELFE-203ENST00000426722 TRIM49BA6NDI0 452 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 M0QYV0 167 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 TNFSF14O43557 240 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 GABBR2O75899 941 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 MOCS3O95396 460 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 SRPRAP08240 638 aaKnown RBP13.37□□□□□ -0.27
NELFE-203ENST00000426722 SLC6A4P31645 630 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 GRK6P43250 576 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 ACADSBP45954 432 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 RPL34P49207 117 aaKnown RBP13.37□□□□□ -0.27
NELFE-203ENST00000426722 RGS7P49802 495 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 CCT8P50990 548 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 SGSHP51688 502 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 RACK1P63244 317 aaKnown RBP13.37□□□□□ -0.27
NELFE-203ENST00000426722 GCNT1Q02742 428 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 MEA1Q16626 185 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 HNRNPA1L2Q32P51 320 aaKnown RBP13.37□□□□□ -0.27
NELFE-203ENST00000426722 INAVAQ3KP66 663 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 CCDC40Q4G0X9 1142 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 KIAA0895LQ68EN5 471 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 RFWD3Q6PCD5 774 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 ZNF366Q8N895 744 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 WFDC5Q8TCV5 224 aa13.37□□□□□ -0.27
NELFE-203ENST00000426722 PABPC3Q9H361 631 aaKnown RBP13.37□□□□□ -0.27
NELFE-203ENST00000426722 TP53BP1Q12888 1972 aaPredicted RBP13.37□□□□□ -0.27
NELFE-203ENST00000426722 GOLGA6L7A0A1B0GV03 622 aa13.36□□□□□ -0.27
NELFE-203ENST00000426722 A0A1W2PPC4 97 aa13.36□□□□□ -0.27
NELFE-203ENST00000426722 E9PAM4 449 aa13.36□□□□□ -0.27
NELFE-203ENST00000426722 RNF225M0QZC1 329 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms