RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 CCL22O00626 93 aa10.48□□□□□ -0.73
VPS37A-202ENST00000425020 CELF2O95319 508 aaKnown RBP10.48□□□□□ -0.73
VPS37A-202ENST00000425020 SERPINE1P05121 402 aa10.48□□□□□ -0.73
VPS37A-202ENST00000425020 DDX39BQ13838 428 aaKnown RBP10.48□□□□□ -0.73
VPS37A-202ENST00000425020 OASLQ15646 514 aaKnown RBP10.48□□□□□ -0.73
VPS37A-202ENST00000425020 OTUD3Q5T2D3 398 aaPredicted RBP10.48□□□□□ -0.73
VPS37A-202ENST00000425020 C10orf107Q8IVU9 208 aa10.48□□□□□ -0.73
VPS37A-202ENST00000425020 PRPF18Q99633 342 aaKnown RBP10.48□□□□□ -0.73
VPS37A-202ENST00000425020 DCUN1D5Q9BTE7 237 aa10.48□□□□□ -0.73
VPS37A-202ENST00000425020 ASB7Q9H672 318 aa10.48□□□□□ -0.73
VPS37A-202ENST00000425020 EFCAB1Q9HAE3 211 aa10.48□□□□□ -0.73
VPS37A-202ENST00000425020 ZNF358Q9NW07 568 aa10.48□□□□□ -0.73
VPS37A-202ENST00000425020 CLIC5Q9NZA1 410 aa10.48□□□□□ -0.73
VPS37A-202ENST00000425020 STX18Q9P2W9 335 aaKnown RBP10.48□□□□□ -0.73
VPS37A-202ENST00000425020 DRG1Q9Y295 367 aaKnown RBP10.48□□□□□ -0.73
VPS37A-202ENST00000425020 ORC6Q9Y5N6 252 aa10.48□□□□□ -0.73
VPS37A-202ENST00000425020 THP07101 528 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 SERPINB8P50452 374 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 OGDHQ02218 1023 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 CA9Q16790 459 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 CELF3Q5SZQ8 465 aaKnown RBP10.47□□□□□ -0.73
VPS37A-202ENST00000425020 CERCAMQ5T4B2 595 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 C9orf131Q5VYM1 1079 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 LPCAT4Q643R3 524 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 RNF43Q68DV7 783 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 C16orf89Q6UX73 402 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 VPS50Q96JG6 964 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 OLFM3Q96PB7 478 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 DRC3Q9H069 523 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 NMRAL1Q9HBL8 299 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 KIAA1257Q9ULG3 409 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 PNMA8BQ9ULN7 279 aaPredicted RBP10.47□□□□□ -0.73
VPS37A-202ENST00000425020 LMO7Q8WWI1 1683 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 CITO14578 2027 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 MYH7P12883 1935 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 PDHXO00330 501 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 SH3BGRLO75368 114 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 PAEPP09466 180 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 ERCC2P18074 760 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 ACAP1Q15027 740 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 KYAT1Q16773 422 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 TRMT5Q32P41 509 aaKnown RBP10.47□□□□□ -0.73
VPS37A-202ENST00000425020 MFSD5Q6N075 450 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 SLC27A1Q6PCB7 646 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 ZNF572Q7Z3I7 529 aaPredicted RBP10.47□□□□□ -0.73
VPS37A-202ENST00000425020 C12orf56Q8IXR9 622 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 SERAC1Q96JX3 654 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 ZBTB18Q99592 522 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 MUC3BQ9H195 1237 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 PCDH18Q9HCL0 1135 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 CASS4Q9NQ75 786 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.47□□□□□ -0.73
VPS37A-202ENST00000425020 LRCH1Q9Y2L9 728 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 SNX10Q9Y5X0 201 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 WASF2Q9Y6W5 498 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 ARFGEF2Q9Y6D5 1785 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 THRAP10827 490 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 NFKB1P19838 968 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 HMOX2P30519 316 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 SCNN1BP51168 640 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 CDH13P55290 713 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 OLIG2Q13516 323 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 DLG2Q15700 870 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 MSS51Q4VC12 460 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 RNF220Q5VTB9 566 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 ILDR2Q71H61 639 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 TMC7Q7Z402 723 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 PLD5Q8N7P1 536 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 RBM15BQ8NDT2 890 aaKnown RBP10.47□□□□□ -0.73
VPS37A-202ENST00000425020 ZNF317Q96PQ6 595 aaPredicted RBP10.47□□□□□ -0.73
VPS37A-202ENST00000425020 ZNF184Q99676 751 aaPredicted RBP10.47□□□□□ -0.73
VPS37A-202ENST00000425020 FRMD8Q9BZ67 464 aaPredicted RBP10.47□□□□□ -0.73
VPS37A-202ENST00000425020 SMPD4Q9NXE4 827 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 GPRC5DQ9NZD1 345 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 OR12D3Q9UGF7 316 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 ITGA11Q9UKX5 1188 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 DSEQ9UL01 958 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 FAM50BQ9Y247 325 aa10.47□□□□□ -0.73
VPS37A-202ENST00000425020 TIMM44O43615 452 aa10.46□□□□□ -0.73
VPS37A-202ENST00000425020 EDIL3O43854 480 aa10.46□□□□□ -0.73
VPS37A-202ENST00000425020 RASSF9O75901 435 aa10.46□□□□□ -0.73
VPS37A-202ENST00000425020 RNASEH2BQ5TBB1 312 aaKnown RBP10.46□□□□□ -0.73
VPS37A-202ENST00000425020 KCTD4Q8WVF5 259 aa10.46□□□□□ -0.73
VPS37A-202ENST00000425020 ERLEC1Q96DZ1 483 aa10.46□□□□□ -0.73
VPS37A-202ENST00000425020 DPEP3Q9H4B8 488 aa10.46□□□□□ -0.73
VPS37A-202ENST00000425020 SYBUQ9NX95 663 aa10.46□□□□□ -0.73
VPS37A-202ENST00000425020 MYO18AQ92614 2054 aaKnown RBP10.46□□□□□ -0.73
VPS37A-202ENST00000425020 SRP72O76094 671 aaKnown RBP10.46□□□□□ -0.74
VPS37A-202ENST00000425020 LYPLA2O95372 231 aa10.46□□□□□ -0.74
VPS37A-202ENST00000425020 SP100P23497 879 aaPredicted RBP10.46□□□□□ -0.74
VPS37A-202ENST00000425020 SCNN1GP51170 649 aa10.46□□□□□ -0.74
VPS37A-202ENST00000425020 SPDYCQ5MJ68 293 aa10.46□□□□□ -0.74
VPS37A-202ENST00000425020 WASHC2DQ5SRD0 308 aa10.46□□□□□ -0.74
VPS37A-202ENST00000425020 XYLT1Q86Y38 959 aa10.46□□□□□ -0.74
VPS37A-202ENST00000425020 ZDHHC14Q8IZN3 488 aa10.46□□□□□ -0.74
VPS37A-202ENST00000425020 PBXIP1Q96AQ6 731 aa10.46□□□□□ -0.74
VPS37A-202ENST00000425020 P2RY11Q96G91 374 aa10.46□□□□□ -0.74
VPS37A-202ENST00000425020 EXOC2Q96KP1 924 aa10.46□□□□□ -0.74
VPS37A-202ENST00000425020 EBNA1BP2Q99848 306 aaKnown RBP10.46□□□□□ -0.74
VPS37A-202ENST00000425020 EML4Q9HC35 981 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms