RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CACNA2D2Q9NY47 1150 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 GGA2Q9UJY4 613 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RAB23Q9ULC3 237 aa23.12■■□□□ 1.29
PTCHD3P2-201ENST00000424937 OTOGLQ3ZCN5 2332 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ALDH1A2O94788 518 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 GJB6O95452 261 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CALB1P05937 261 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PABPC1P11940 636 aaKnown RBP23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PBX1P40424 430 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 FIGNQ5HY92 759 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CARNMT1Q8N4J0 409 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ZNF557Q8N988 423 aaPredicted RBP23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 MDGA1Q8NFP4 955 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 WFIKKN2Q8TEU8 576 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 GAB3Q8WWW8 586 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 NT5C3BQ969T7 300 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ERLEC1Q96DZ1 483 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CFAP57Q96MR6 1250 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 HINFPQ9BQA5 517 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 NUP58Q9BVL2 599 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 EDEM3Q9BZQ6 932 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ELOVL2Q9NXB9 296 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 BCCIPQ9P287 314 aaKnown RBP eCLIP23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 EBF1Q9UH73 591 aa23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 NYNRINQ9P2P1 1898 aaKnown RBP23.11■■□□□ 1.29
PTCHD3P2-201ENST00000424937 THADAQ6YHU6 1953 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 DOCK4Q8N1I0 1966 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RPP40O75818 363 aaKnown RBP23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TNFAIP3P21580 790 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CD70P32970 193 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 GGCXP38435 758 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 GSCP56915 257 aaPredicted RBP23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CDH18Q13634 790 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TMEM215Q68D42 235 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CHST9Q7L1S5 443 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 MON1BQ7L1V2 547 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ARCQ7LC44 396 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RASSF3Q86WH2 238 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CCDC117Q8IWD4 279 aaPredicted RBP23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 AHI1Q8N157 1196 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RNF214Q8ND24 703 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 HMGB4Q8WW32 186 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SORCS1Q8WY21 1168 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PGAP3Q96FM1 320 aaPredicted RBP23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PRMT1Q99873 361 aaKnown RBP23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SYT11Q9BT88 431 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 WDCPQ9H6R7 721 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 AIPL1Q9NZN9 384 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RAD54BQ9Y620 910 aa23.1■■□□□ 1.29
PTCHD3P2-201ENST00000424937 GPR179Q6PRD1 2367 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PAGE1O75459 146 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 LUC7L3O95232 432 aaKnown RBP23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 F9P00740 461 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CXCR3P49682 368 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ATXN1P54253 815 aaKnown RBP23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ATP11AP98196 1134 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 MTA1Q13330 715 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 BRMS1LQ5PSV4 323 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CIR1Q86X95 450 aaPredicted RBP23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 JOSD2Q8TAC2 188 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 OLIG1Q8TAK6 271 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 GABRG3Q99928 467 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SELENOOQ9BVL4 669 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 XPO4Q9C0E2 1151 aaKnown RBP23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TKTL2Q9H0I9 626 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 HAUS4Q9H6D7 363 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 THAP10Q9P2Z0 257 aaPredicted RBP23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 NCDNQ9UBB6 729 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PAXBP1Q9Y5B6 917 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 HS3ST4Q9Y661 456 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 STON1Q9Y6Q2 735 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CEP192Q8TEP8 1941 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SDK1Q7Z5N4 2213 aa23.09■■□□□ 1.29
PTCHD3P2-201ENST00000424937 A0A1W2PQF6 199 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TMCO5BA8MYB1 307 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 WASH3PC4AMC7 463 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 H0Y626 953 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ADCY5O95622 1261 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TPM3P06753 285 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RDXP35241 583 aaKnown RBP23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 IL12RB1P42701 662 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 C1QBPQ07021 282 aaKnown RBP23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 KLHL30Q0D2K2 578 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ZNF234Q14588 700 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 CDO1Q16878 200 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RABGAP1LQ5R372 815 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ACAD10Q6JQN1 1059 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 KIAA1211LQ6NV74 962 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ADIPOR2Q86V24 386 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 PGBD3Q8N328 593 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 C3orf20Q8ND61 904 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 FIBINQ8TAL6 211 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 RXFP2Q8WXD0 754 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 SIK2Q9H0K1 926 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 ARHGEF38Q9NXL2 777 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 TAS2R14Q9NYV8 317 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 VANGL2Q9ULK5 521 aa23.08■■□□□ 1.29
PTCHD3P2-201ENST00000424937 EP300Q09472 2414 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms